RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 KCNS3Q9BQ31 491 aa16.41■□□□□ 0.22
CYSTM1-201ENST00000261811 TEX12Q9BXU0 123 aa16.41■□□□□ 0.22
CYSTM1-201ENST00000261811 FBXL3Q9UKT7 428 aa16.41■□□□□ 0.22
CYSTM1-201ENST00000261811 ITPR2Q14571 2701 aa16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 PRSS37A4D1T9 235 aa16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 G3V2T6 193 aa16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 H3BN98 237 aa16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 M0R1B8 84 aa16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 B4GALT1P15291 398 aa16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 ARR3P36575 388 aa16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 FXYD6P3P58550 94 aa16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 C3orf36Q3SXR2 165 aa16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 CDC20BQ86Y33 519 aa16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 ZDHHC13Q8IUH4 622 aa16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 SVOPLQ8N434 492 aa16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 FAM169BQ8N8A8 192 aa16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 NSMAFQ92636 917 aa16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 RASD2Q96D21 266 aa16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 EGLN3Q9H6Z9 239 aa16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 TMEM38BQ9NVV0 291 aa16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 RNF115Q9Y4L5 304 aa16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 ANKRD17O75179 2603 aaKnown RBP16.4■□□□□ 0.22
CYSTM1-201ENST00000261811 ABCA12Q86UK0 2595 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 SLC22A23A1A5C7 686 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 SEC14L2O76054 403 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 CD79AP11912 226 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 ZNF23P17027 643 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 CRABP1P29762 137 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 BSPH1Q075Z2 132 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 GSG1Q2KHT4 349 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 SLC36A2Q495M3 483 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 MESTQ5EB52 335 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 CLEC12AQ5QGZ9 265 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 TMEM179BQ7Z7N9 219 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 OR2T33Q8NG76 320 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 PYDC1Q8WXC3 89 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 STMN2Q93045 179 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 CENPNQ96H22 339 aaPredicted RBP16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 SNX18Q96RF0 628 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 NIPSNAP1Q9BPW8 284 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 TSSK6Q9BXA6 273 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 C1QTNF6Q9BXI9 259 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 APCP25054 2843 aa16.39■□□□□ 0.21
CYSTM1-201ENST00000261811 DSCAMO60469 2012 aa16.38■□□□□ 0.21
CYSTM1-201ENST00000261811 SLC2A10O95528 541 aa16.38■□□□□ 0.21
CYSTM1-201ENST00000261811 RAB36O95755 333 aa16.38■□□□□ 0.21
CYSTM1-201ENST00000261811 CBR1P16152 277 aa16.38■□□□□ 0.21
CYSTM1-201ENST00000261811 MRPS34P82930 218 aaKnown RBP16.38■□□□□ 0.21
CYSTM1-201ENST00000261811 TMEM53Q6P2H8 277 aa16.38■□□□□ 0.21
CYSTM1-201ENST00000261811 SLC25A47Q6Q0C1 308 aa16.38■□□□□ 0.21
CYSTM1-201ENST00000261811 IL17RDQ8NFM7 739 aa16.38■□□□□ 0.21
CYSTM1-201ENST00000261811 LRTOMTQ8WZ04 291 aa16.38■□□□□ 0.21
CYSTM1-201ENST00000261811 LURAP1Q96LR2 239 aa16.38■□□□□ 0.21
CYSTM1-201ENST00000261811 NELFAQ9H3P2 528 aa16.38■□□□□ 0.21
CYSTM1-201ENST00000261811 SEC61A2Q9H9S3 476 aa16.38■□□□□ 0.21
CYSTM1-201ENST00000261811 SIAEQ9HAT2 523 aa16.38■□□□□ 0.21
CYSTM1-201ENST00000261811 NTN4Q9HB63 628 aa16.38■□□□□ 0.21
CYSTM1-201ENST00000261811 ENOPH1Q9UHY7 261 aa16.38■□□□□ 0.21
CYSTM1-201ENST00000261811 A0A1W2PPL8 197 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 H7C1C5 153 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 SIAH2O43255 324 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 KHDRBS3O75525 346 aaKnown RBP16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 IFNGP01579 166 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 CD40P25942 277 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 LCN6P62502 163 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 FMODQ06828 376 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 SGCAQ16586 387 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 LEG1Q6P5S2 330 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 ZNF704Q6ZNC4 412 aaPredicted RBP16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 SLC16A14Q7RTX9 510 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 PIAS4Q8N2W9 510 aaPredicted RBP16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 NMD3Q96D46 503 aaKnown RBP16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 SLC38A2Q96QD8 506 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 OSBPL10Q9BXB5 764 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 SYT4Q9H2B2 425 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 RERGLQ9H628 205 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 RNF121Q9H920 327 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 CCNB1IP1Q9NPC3 277 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 VSX1Q9NZR4 365 aaPredicted RBP16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 KLHL21Q9UJP4 597 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 POU2F3Q9UKI9 436 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 CADP27708 2225 aa16.37■□□□□ 0.21
CYSTM1-201ENST00000261811 DPRXA6NFQ7 191 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 ABCD4O14678 606 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 SLC16A7O60669 478 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 SOX14O95416 240 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 PTHP01270 115 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 CRYAAP02489 173 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 OSMP13725 252 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 PRKACGP22612 351 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 PCBD1P61457 104 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 RAB1AP62820 205 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 TUBA1BP68363 451 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 TUBA4AP68366 448 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 SLC36A3Q495N2 470 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 SLC27A4Q6P1M0 643 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 SLC22A25Q6T423 547 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 SEZ6L2Q6UXD5 910 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 TUBA1AQ71U36 451 aa16.36■□□□□ 0.21
CYSTM1-201ENST00000261811 AMIGO2Q86SJ2 522 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms