RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 ABCA3Q99758 1704 aa11.94□□□□□ -0.5
TMEM260-201ENST00000261556 UNC119BA6NIH7 251 aa11.94□□□□□ -0.5
TMEM260-201ENST00000261556 RPA2P15927 270 aa11.94□□□□□ -0.5
TMEM260-201ENST00000261556 ZNF823P16415 610 aa11.94□□□□□ -0.5
TMEM260-201ENST00000261556 GPX2P18283 190 aa11.94□□□□□ -0.5
TMEM260-201ENST00000261556 SERPINA2P20848 420 aa11.94□□□□□ -0.5
TMEM260-201ENST00000261556 CXCR1P25024 350 aa11.94□□□□□ -0.5
TMEM260-201ENST00000261556 FGF9P31371 208 aaPredicted RBP11.94□□□□□ -0.5
TMEM260-201ENST00000261556 PBX2P40425 430 aa11.94□□□□□ -0.5
TMEM260-201ENST00000261556 TBPL1P62380 186 aa11.94□□□□□ -0.5
TMEM260-201ENST00000261556 ARSJQ5FYB0 599 aaPredicted RBP11.94□□□□□ -0.5
TMEM260-201ENST00000261556 UBE2NLQ5JXB2 153 aa11.94□□□□□ -0.5
TMEM260-201ENST00000261556 OLIG3Q7RTU3 272 aa11.94□□□□□ -0.5
TMEM260-201ENST00000261556 SLC35G3Q8N808 338 aa11.94□□□□□ -0.5
TMEM260-201ENST00000261556 OR13C2Q8NGS9 318 aa11.94□□□□□ -0.5
TMEM260-201ENST00000261556 LSM5Q9Y4Y9 91 aaKnown RBP11.94□□□□□ -0.5
TMEM260-201ENST00000261556 ZNF354AO60765 605 aaPredicted RBP11.93□□□□□ -0.5
TMEM260-201ENST00000261556 CEBPBP17676 345 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 ZNF322Q6U7Q0 402 aaPredicted RBP11.93□□□□□ -0.5
TMEM260-201ENST00000261556 THEM6Q8WUY1 208 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 DYRK2Q92630 601 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 OSTF1Q92882 214 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 HHIPL1Q96JK4 782 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 SLC52A3Q9NQ40 469 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 ASB6Q9NWX5 421 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 TRAPPC6AO75865 159 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 SLC16A8O95907 504 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 PRR35P0CG20 571 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 ATF1P18846 271 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 DIO1P49895 249 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 LCTLQ6UWM7 567 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 ZNF584Q8IVC4 421 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 OR11G2Q8NGC1 345 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 DOK4Q8TEW6 326 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 OIT3Q8WWZ8 545 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 CDC6Q99741 560 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 TAF9BQ9HBM6 251 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 CSNK1G1Q9HCP0 422 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 MEMO1Q9Y316 297 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 NME7Q9Y5B8 376 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 NPIPB15A6NHN6 443 aaPredicted RBP11.93□□□□□ -0.5
TMEM260-201ENST00000261556 HLA-DQB1P01920 261 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 CSF1P09603 554 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 TSPAN31Q12999 210 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 SLC9A3R2Q15599 337 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 C11orf87Q6NUJ2 197 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 RTL10Q7L3V2 364 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 FAM213BQ8TBF2 198 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 SLC7A13Q8TCU3 470 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 CD200R1Q8TD46 325 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 FAM3CQ92520 227 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 SEC61A2Q9H9S3 476 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 CKLFQ9UBR5 152 aa11.93□□□□□ -0.5
TMEM260-201ENST00000261556 EXOGQ9Y2C4 368 aaKnown RBP11.93□□□□□ -0.5
TMEM260-201ENST00000261556 HIDE1A8MVS5 230 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 SEMA4FO95754 770 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 CHRM4P08173 479 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 ZNF888P0CJ79 500 aaPredicted RBP11.92□□□□□ -0.5
TMEM260-201ENST00000261556 CASRP41180 1078 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 SLC6A11P48066 632 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 SNRPNP63162 240 aaKnown RBP11.92□□□□□ -0.5
TMEM260-201ENST00000261556 GUK1Q16774 197 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 AFMIDQ63HM1 303 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 PPP1R3BQ86XI6 285 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 CALHM3Q86XJ0 350 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 ZNF761Q86XN6 746 aaPredicted RBP11.92□□□□□ -0.5
TMEM260-201ENST00000261556 LRRC56Q8IYG6 542 aaPredicted RBP11.92□□□□□ -0.5
TMEM260-201ENST00000261556 SLC43A2Q8N370 569 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 OR4K14Q8NGD5 310 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 USP3Q9Y6I4 520 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 OR52A4PA6NMU1 304 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 FOXE1O00358 373 aaPredicted RBP11.92□□□□□ -0.5
TMEM260-201ENST00000261556 EIF1AYO14602 144 aaKnown RBP11.92□□□□□ -0.5
TMEM260-201ENST00000261556 HOXB5P09067 269 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 ELAVL4P26378 380 aaKnown RBP11.92□□□□□ -0.5
TMEM260-201ENST00000261556 EIF1AXP47813 144 aaKnown RBP11.92□□□□□ -0.5
TMEM260-201ENST00000261556 PNLIPRP2P54317 469 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 H2BFSP57053 126 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 HBA1P69905 142 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 NNATQ16517 81 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 TRIM2Q9C040 744 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 GDE1Q9NZC3 331 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 SCDO00767 359 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 GPR37L1O60883 481 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 LIMS3P0CW19 117 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 LIMS4P0CW20 117 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 ZNF28P17035 718 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 IRS1P35568 1242 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 OR3A1P47881 315 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 LRIF1Q5T3J3 769 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 ZNF836Q6ZNA1 936 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 BBS1Q8NFJ9 593 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 OR52E4Q8NGH9 312 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 OR4C16Q8NGL9 310 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 HAS2Q92819 552 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 ZNF689Q96CS4 500 aaPredicted RBP11.92□□□□□ -0.5
TMEM260-201ENST00000261556 MRI1Q9BV20 369 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 PLEKHA1Q9HB21 404 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 WBP1LQ9NX94 342 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 FTSJ1Q9UET6 329 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms