RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 A0A0G2JMZ2 1700 aa12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 LRRC37A2A6NM11 1700 aa12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 POLR2AP24928 1970 aaKnown RBP12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 C16orf97H3BN30 126 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 LY86O95711 162 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 PLATP00750 562 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 NGFRP08138 427 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 CHRM2P08172 466 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 STSP08842 583 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 DBHP09172 617 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 IKZF1Q13422 519 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 GTDC1Q4AE62 458 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 LHFPL3Q86UP9 236 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 PTRH1Q86Y79 214 aaKnown RBP12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 PARP8Q8N3A8 854 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 TSSK2Q96PF2 358 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 NEUROG3Q9Y4Z2 214 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 V9GY05 133 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 SLC22A5O76082 557 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 IDH3GP51553 393 aaPredicted RBP12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 C21orf58P58505 322 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 GNB2P62879 340 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 FUT7Q11130 342 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 P2RY6Q15077 328 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 DPY19L4Q7Z388 723 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 ERVK13-1Q9NX77 482 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 RCE1Q9Y256 329 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 PATE3B3GLJ2 98 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 MAS1P04201 325 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 C21orf33P30042 268 aaPredicted RBP12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 RNASE12Q5GAN4 147 aaKnown RBP12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 ELFN2Q5R3F8 820 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 ZBTB8BQ8NAP8 495 aaPredicted RBP12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 OR5D13Q8NGL4 314 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 FOCADQ5VW36 1801 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 SCN10AQ9Y5Y9 1956 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 CD300LBA8K4G0 201 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 E9PI62 339 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 CX3CR1P49238 355 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 ZNF141Q15928 474 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 SAMD12Q8N8I0 201 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 OR13G1Q8NGZ3 307 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 SCARF2Q96GP6 870 aaPredicted RBP12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 GAL3ST1Q99999 423 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 NICN1Q9BSH3 213 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 SLAMF8Q9P0V8 285 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 OR52A1Q9UKL2 312 aa12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 GPR55Q9Y2T6 319 aaPredicted RBP12.2□□□□□ -0.46
PRPF38A-201ENST00000257181 A0A1W2PR77 199 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 C19orf67A6NJJ6 358 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 F13BP05160 661 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 IGFBP6P24592 240 aaPredicted RBP12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 FOXF1Q12946 379 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 PRAMEF9Q5VWM5 478 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 MUC20Q8N307 709 aaPredicted RBP12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 TNFRSF13CQ96RJ3 184 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 PHB2Q99623 299 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 FOXB1Q99853 325 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 CPNE5Q9HCH3 593 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 OR14J1Q9UGF5 321 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 OR5V1Q9UGF6 321 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 KIAA0100Q14667 2235 aaKnown RBP12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 OR2AT4A6NND4 320 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 UPK1AO00322 258 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 DEGS1O15121 323 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 RBP2P50120 134 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 MLLT11Q13015 90 aaPredicted RBP12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 INO80CQ6PI98 192 aaPredicted RBP12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 EMG1Q92979 244 aaKnown RBP12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 PLA2G3Q9NZ20 509 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 EXO1Q9UQ84 846 aaKnown RBP12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 ZNF517Q6ZMY9 492 aaPredicted RBP12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 AKAP14Q86UN6 197 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 ZDHHC23Q8IYP9 409 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 TMEM105Q8N8V8 129 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 SYNPRQ8TBG9 265 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 HSD17B8Q92506 261 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 AMBNQ9NP70 447 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 LANCL2Q9NS86 450 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 EXTL2Q9UBQ6 330 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 TBC1D24Q9ULP9 559 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 GABARAPH6UMI1 98 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 HMGN4O00479 90 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 GABARAPO95166 117 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 NRASP01111 189 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 SFTPBP07988 381 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 LTBRP36941 435 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 RPL23AP62750 156 aaKnown RBP12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 ROR2Q01974 943 aaKnown RBP12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 Q499Y3 187 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 EGLN2Q96KS0 407 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 FUZQ9BT04 418 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 GP6Q9HCN6 339 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 GPR52Q9Y2T5 361 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 HRH3Q9Y5N1 445 aa12.19□□□□□ -0.46
PRPF38A-201ENST00000257181 RTL8BQ17RB0 113 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 CHDHQ8NE62 594 aaPredicted RBP12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 OR2M7Q8NG81 312 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 ZNF501Q96CX3 271 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms