RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 LINC01599Q8WXQ3 324 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 SEC22CQ9BRL7 303 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 TCEAL2Q9H3H9 227 aaPredicted RBP17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 TNFRSF12AQ9NP84 129 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 FCMRO60667 390 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 NDUFB7P17568 137 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 CR2P20023 1033 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 FPR3P25089 353 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 DLEU7Q6UYE1 221 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 LINC01465Q8N7H1 131 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 KCNG3Q8TAE7 436 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 APH1AQ96BI3 265 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 ZNF436Q9C0F3 470 aaPredicted RBP17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 CTSLP07711 333 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 TRHRP34981 398 aaPredicted RBP17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 CATR1Q13166 79 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 TMEM99Q8N816 258 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 CNTNAP3Q9BZ76 1288 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 MRPS2Q9Y399 296 aaKnown RBP17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 ICOSLGO75144 302 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 CLN5O75503 358 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 STEAP1BQ6NZ63 245 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 SDF2Q99470 211 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 PHF7Q9BWX1 381 aaPredicted RBP17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 SLC5A6Q9Y289 635 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 TOR1AO14656 332 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 ZNF26P17031 533 aaPredicted RBP17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 ETV1P50549 477 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 METAP1P53582 386 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 FJX1Q86VR8 437 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 EGFL6Q8IUX8 553 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 RBMXL3Q8N7X1 1067 aaKnown RBP17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 RNF170Q96K19 258 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 TSSK2Q96PF2 358 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 UBBP0CG47 229 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 UBCP0CG48 685 aaKnown RBP17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 TEKQ02763 1124 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 ZMAT1Q5H9K5 638 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 TMEM174Q8WUU8 243 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 ANKRD9Q96BM1 317 aaPredicted RBP17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 TMEM38AQ9H6F2 299 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 STMND1H3BQB6 276 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 EIF1BO60739 113 aaKnown RBP17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 ACSM1Q08AH1 577 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 RTL6Q6ICC9 239 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 ETFBKMTQ8IXQ9 262 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 GIMAP5Q96F15 307 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 TAS2R4Q9NYW5 299 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 TXNL1O43396 289 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 ANXA7P20073 488 aaKnown RBP17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 PSMB1P20618 241 aaKnown RBP17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 HSD17B7P56937 341 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 RIPPLY1Q0D2K3 151 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 OR51H1Q8NH63 302 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 C11orf54Q9H0W9 315 aaPredicted RBP17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 CRLF2Q9HC73 371 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 FABP7O15540 132 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 KIAA1024LP59773 190 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 RPL11P62913 178 aaKnown RBP17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 MFGE8Q08431 387 aaPredicted RBP17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 TBC1D28Q2M2D7 210 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 OR2B11Q5JQS5 317 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 VASH2Q86V25 355 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 GPR78Q96P69 363 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 ARRDC1-AS1Q9H2J1 176 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 GNB4Q9HAV0 340 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 C1orf123Q9NWV4 160 aa17.13■□□□□ 0.33
SMARCC1-201ENST00000254480 GLCEO94923 617 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 GPX2P18283 190 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 PEA15Q15121 130 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 HIST2H3PS2Q5TEC6 136 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 ANKRD16Q6P6B7 361 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 OR1N1Q8NGS0 311 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 OR51E1Q8TCB6 317 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 OR2M2Q96R28 347 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 TRIB1Q96RU8 372 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 NIPAL2Q9H841 368 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 FAM221AA4D161 298 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 AQP7O14520 342 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 PAPLNO95428 1278 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 QDPRP09417 244 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 HIST1H1CP16403 213 aaKnown RBP17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 EIF1P41567 113 aaKnown RBP17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 MAP2K6P52564 334 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 BRICD5Q6PL45 260 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 SAMD10Q9BYL1 202 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 TMEM221A6NGB7 291 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 CASP3P42574 277 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 P2RX1P51575 399 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 OR13C5Q8NGS8 318 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 OR56B4Q8NH76 319 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 ABHD6Q9BV23 337 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 ING1Q9UK53 422 aaPredicted RBP17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 C4AP0C0L4 1744 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 RPS10-NUDT3A0A1W2PQS6 291 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 RPS10P46783 165 aaKnown RBP17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 Q6ZS52 159 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 C19orf12Q9NSK7 152 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 CHST2Q9Y4C5 530 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 KCNK2O95069 426 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms