RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 OCIAD1Q9NX40 245 aa16.84■□□□□ 0.29
PDLIM4-201ENST00000253754 MRPL15Q9P015 296 aaKnown RBP16.84■□□□□ 0.29
PDLIM4-201ENST00000253754 VDAC3Q9Y277 283 aa16.84■□□□□ 0.29
PDLIM4-201ENST00000253754 IGLV3-12A0A075B6K2 115 aa16.83■□□□□ 0.28
PDLIM4-201ENST00000253754 A0A0A6YYJ9 748 aa16.83■□□□□ 0.28
PDLIM4-201ENST00000253754 PDCD5O14737 125 aa16.83■□□□□ 0.28
PDLIM4-201ENST00000253754 MT-ND4P03905 459 aa16.83■□□□□ 0.28
PDLIM4-201ENST00000253754 GIFP27352 417 aa16.83■□□□□ 0.28
PDLIM4-201ENST00000253754 KIR3DL2P43630 455 aa16.83■□□□□ 0.28
PDLIM4-201ENST00000253754 CCR6P51684 374 aa16.83■□□□□ 0.28
PDLIM4-201ENST00000253754 PLA2G2CQ5R387 149 aa16.83■□□□□ 0.28
PDLIM4-201ENST00000253754 ARSKQ6UWY0 536 aa16.83■□□□□ 0.28
PDLIM4-201ENST00000253754 WDFY1Q8IWB7 410 aa16.83■□□□□ 0.28
PDLIM4-201ENST00000253754 ZNF676Q8N7Q3 588 aa16.83■□□□□ 0.28
PDLIM4-201ENST00000253754 OTOSQ8NHW6 89 aa16.83■□□□□ 0.28
PDLIM4-201ENST00000253754 ARL5BQ96KC2 179 aa16.83■□□□□ 0.28
PDLIM4-201ENST00000253754 TCF7L1Q9HCS4 588 aa16.83■□□□□ 0.28
PDLIM4-201ENST00000253754 MED11Q9P086 117 aa16.83■□□□□ 0.28
PDLIM4-201ENST00000253754 TRBV5-5A0A0J9YX44 114 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 TRBV11-1A0A0K0K1C0 115 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 TMEM200CA6NKL6 621 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 NTN3O00634 580 aaPredicted RBP16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 GALR2O43603 387 aaPredicted RBP16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 GDF9O60383 454 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 ALOX12BO75342 701 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 OR6A2O95222 327 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 MAS1P04201 325 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 RRAS2P62070 204 aaPredicted RBP16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 PITPNAQ00169 270 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 Q5BKY6 102 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 PAPD4Q6PIY7 484 aaKnown RBP16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 LINGO2Q7L985 606 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 PPP1R14AQ96A00 147 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 TXNIPQ9H3M7 391 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 OR5V1Q9UGF6 321 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 KIF26BQ2KJY2 2108 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 H0YC42 278 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 RGS13O14921 159 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 MPZL1O95297 269 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 AHSA1O95433 338 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 SPARCP09486 303 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 ZNF883P0CG24 379 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 PTHLHP12272 177 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 EGR3Q06889 387 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 EFR3AQ14156 821 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 CDK10Q15131 360 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 CLPPQ16740 277 aaPredicted RBP16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 WDR38Q5JTN6 314 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 MDGA2Q7Z553 956 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 LRRTM1Q86UE6 522 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 WDR77Q9BQA1 342 aaPredicted RBP16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 AKIRIN1Q9H9L7 192 aaPredicted RBP16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 ELOVL3Q9HB03 270 aa16.82■□□□□ 0.28
PDLIM4-201ENST00000253754 IGLV1-36A0A0B4J1U3 117 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 TPD52L2O43399 206 aaKnown RBP16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 SLC26A5P58743 744 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 PLA2G7Q13093 441 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 DBX2Q6ZNG2 339 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 PPP1R3BQ86XI6 285 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 TCTE3Q8IZS6 198 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 ADAMTS14Q8WXS8 1223 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 TMEM106AQ96A25 262 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 TMEM246Q9BRR3 403 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 FKBP7Q9Y680 259 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 CACNA1CQ13936 2221 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 SLC22A23A1A5C7 686 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 PRR33A8MZF0 331 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 FTCDNL1E5RQL4 147 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 YES1P07947 543 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 GDNFP39905 211 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 MRPL28Q13084 256 aaKnown RBP16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 SMIM4Q8WVI0 70 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 AKAP1Q92667 903 aaKnown RBP eCLIP16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 C4orf45Q96LM5 186 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 GTF2A1LQ9UNN4 478 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 SLC22A13Q9Y226 551 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 TMEM14AQ9Y6G1 99 aa16.81■□□□□ 0.28
PDLIM4-201ENST00000253754 TRABD2BA6NFA1 517 aa16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 ADAM8P78325 824 aa16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 KLF9Q13886 244 aaPredicted RBP16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 OR7A5Q15622 319 aa16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 TMPRSS12Q86WS5 348 aa16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 SYNPRQ8TBG9 265 aa16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 NKX3-1Q99801 234 aaPredicted RBP16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 DPAGT1Q9H3H5 408 aa16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 VSX1Q9NZR4 365 aaPredicted RBP16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 ZNF254O75437 659 aa16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 PNPP00491 289 aa16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 TCRBP04435 133 aa16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 TMIGD3P0DMS9 266 aaPredicted RBP16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 EMP2P54851 167 aa16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 DCDP81605 110 aaKnown RBP16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 FMODQ06828 376 aa16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 FOXF1Q12946 379 aa16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 STK35Q8TDR2 534 aa16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 HGDQ93099 445 aa16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 OR8B4Q96RC9 309 aa16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 LRFN3Q9BTN0 628 aa16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 COMMD4Q9H0A8 199 aa16.8■□□□□ 0.28
PDLIM4-201ENST00000253754 ZNF292O60281 2723 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms