RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 CDK20Q8IZL9 346 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 CLDN22Q8N7P3 220 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 NSL1Q96IY1 281 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 TSPAN32Q96QS1 320 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 TLN2Q9Y4G6 2542 aa19.86■□□□□ 0.77
LSM4-201ENST00000252816 SSX4O60224 188 aa19.86■□□□□ 0.77
LSM4-201ENST00000252816 RAB36O95755 333 aa19.86■□□□□ 0.77
LSM4-201ENST00000252816 OR4A8P0C604 315 aa19.86■□□□□ 0.77
LSM4-201ENST00000252816 ZNF35P13682 527 aa19.86■□□□□ 0.77
LSM4-201ENST00000252816 THBS4P35443 961 aa19.86■□□□□ 0.77
LSM4-201ENST00000252816 MNAT1P51948 309 aa19.86■□□□□ 0.77
LSM4-201ENST00000252816 RAB39AQ14964 217 aa19.86■□□□□ 0.77
LSM4-201ENST00000252816 RAB35Q15286 201 aa19.86■□□□□ 0.77
LSM4-201ENST00000252816 ANKDD1AQ495B1 522 aa19.86■□□□□ 0.77
LSM4-201ENST00000252816 CLEC9AQ6UXN8 241 aa19.86■□□□□ 0.77
LSM4-201ENST00000252816 RRM2BQ7LG56 351 aa19.86■□□□□ 0.77
LSM4-201ENST00000252816 ZNF584Q8IVC4 421 aa19.86■□□□□ 0.77
LSM4-201ENST00000252816 ZNF519Q8TB69 540 aa19.86■□□□□ 0.77
LSM4-201ENST00000252816 FAM46AQ96IP4 442 aaKnown RBP19.86■□□□□ 0.77
LSM4-201ENST00000252816 FUZQ9BT04 418 aa19.86■□□□□ 0.77
LSM4-201ENST00000252816 DENND2DQ9H6A0 471 aaPredicted RBP19.86■□□□□ 0.77
LSM4-201ENST00000252816 TMEM5Q9Y2B1 443 aa19.86■□□□□ 0.77
LSM4-201ENST00000252816 UGT2A1Q9Y4X1 527 aa19.86■□□□□ 0.77
LSM4-201ENST00000252816 PDE5AO76074 875 aa19.85■□□□□ 0.77
LSM4-201ENST00000252816 LY6G6DO95868 133 aa19.85■□□□□ 0.77
LSM4-201ENST00000252816 T-ENOLP0DO92 83 aa19.85■□□□□ 0.77
LSM4-201ENST00000252816 OMPP47874 163 aa19.85■□□□□ 0.77
LSM4-201ENST00000252816 LIMS1P48059 325 aa19.85■□□□□ 0.77
LSM4-201ENST00000252816 ZNF84P51523 738 aa19.85■□□□□ 0.77
LSM4-201ENST00000252816 CD47Q08722 323 aa19.85■□□□□ 0.77
LSM4-201ENST00000252816 SPATS1Q496A3 300 aa19.85■□□□□ 0.77
LSM4-201ENST00000252816 ZBED5Q49AG3 693 aa19.85■□□□□ 0.77
LSM4-201ENST00000252816 KRT80Q6KB66 452 aa19.85■□□□□ 0.77
LSM4-201ENST00000252816 SLC25A47Q6Q0C1 308 aa19.85■□□□□ 0.77
LSM4-201ENST00000252816 OR52J3Q8NH60 311 aa19.85■□□□□ 0.77
LSM4-201ENST00000252816 ALG12Q9BV10 488 aa19.85■□□□□ 0.77
LSM4-201ENST00000252816 ZNF442Q9H7R0 627 aa19.85■□□□□ 0.77
LSM4-201ENST00000252816 PMF1-BGLAPU3KQ54 211 aa19.85■□□□□ 0.77
LSM4-201ENST00000252816 RNF223E7ERA6 249 aa19.84■□□□□ 0.77
LSM4-201ENST00000252816 ENTPD5O75356 428 aa19.84■□□□□ 0.77
LSM4-201ENST00000252816 FARS2O95363 451 aaKnown RBP19.84■□□□□ 0.77
LSM4-201ENST00000252816 BMP4P12644 408 aa19.84■□□□□ 0.77
LSM4-201ENST00000252816 ITGA2P17301 1181 aa19.84■□□□□ 0.77
LSM4-201ENST00000252816 NR4A1P22736 598 aa19.84■□□□□ 0.77
LSM4-201ENST00000252816 CDAP32320 146 aa19.84■□□□□ 0.77
LSM4-201ENST00000252816 NUDT6P53370 316 aa19.84■□□□□ 0.77
LSM4-201ENST00000252816 ERVK-25P63136 954 aa19.84■□□□□ 0.77
LSM4-201ENST00000252816 SNTB2Q13425 540 aaKnown RBP19.84■□□□□ 0.77
LSM4-201ENST00000252816 DAG1Q14118 895 aa19.84■□□□□ 0.77
LSM4-201ENST00000252816 EFNB3Q15768 340 aa19.84■□□□□ 0.77
LSM4-201ENST00000252816 NRN1LQ496H8 165 aa19.84■□□□□ 0.77
LSM4-201ENST00000252816 RINLQ6ZS11 566 aa19.84■□□□□ 0.77
LSM4-201ENST00000252816 MAPK1IP1LQ8NDC0 245 aa19.84■□□□□ 0.77
LSM4-201ENST00000252816 NSMAFQ92636 917 aa19.84■□□□□ 0.77
LSM4-201ENST00000252816 SMURF2Q9HAU4 748 aa19.84■□□□□ 0.77
LSM4-201ENST00000252816 ADAM21Q9UKJ8 722 aa19.84■□□□□ 0.77
LSM4-201ENST00000252816 ADAM18Q9Y3Q7 739 aa19.84■□□□□ 0.77
LSM4-201ENST00000252816 NSD1Q96L73 2696 aaPredicted RBP19.84■□□□□ 0.77
LSM4-201ENST00000252816 B9A039 149 aa19.83■□□□□ 0.77
LSM4-201ENST00000252816 PTP4A3O75365 173 aa19.83■□□□□ 0.77
LSM4-201ENST00000252816 SERPINA5P05154 406 aa19.83■□□□□ 0.77
LSM4-201ENST00000252816 SNRPD2P62316 118 aaKnown RBP19.83■□□□□ 0.77
LSM4-201ENST00000252816 MSMPQ1L6U9 139 aa19.83■□□□□ 0.77
LSM4-201ENST00000252816 FAM205BPQ63HN1 556 aa19.83■□□□□ 0.77
LSM4-201ENST00000252816 SLC16A14Q7RTX9 510 aa19.83■□□□□ 0.77
LSM4-201ENST00000252816 LRRC18Q8N456 261 aa19.83■□□□□ 0.77
LSM4-201ENST00000252816 NABP1Q96AH0 204 aa19.83■□□□□ 0.77
LSM4-201ENST00000252816 GPA33Q99795 319 aa19.83■□□□□ 0.77
LSM4-201ENST00000252816 REG4Q9BYZ8 158 aa19.83■□□□□ 0.77
LSM4-201ENST00000252816 PLK3Q9H4B4 646 aa19.83■□□□□ 0.77
LSM4-201ENST00000252816 SIGLEC7Q9Y286 467 aa19.83■□□□□ 0.77
LSM4-201ENST00000252816 TMEM129A0AVI4 362 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 SH3PXD2BA1X283 911 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 A6NIZ1 184 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 LY6HO94772 140 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 HEXAP06865 529 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 CD14P08571 375 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 NPR2P20594 1047 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 ATP6V1B2P21281 511 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 CALB2P22676 271 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 RPL4P36578 427 aaKnown RBP19.82■□□□□ 0.76
LSM4-201ENST00000252816 RAP1BP61224 184 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 RAP1AP62834 184 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 MRPS34P82930 218 aaKnown RBP19.82■□□□□ 0.76
LSM4-201ENST00000252816 SPIBQ01892 262 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 THEM4Q5T1C6 240 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 CYP2R1Q6VVX0 501 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 ARIH2OSQ8N7S6 290 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 MCUR1Q96AQ8 359 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 Q96M85 177 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 SORCS2Q96PQ0 1159 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 SIAEQ9HAT2 523 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 IL1RAPQ9NPH3 570 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 FBXL3Q9UKT7 428 aa19.82■□□□□ 0.76
LSM4-201ENST00000252816 IGHV4-30-2A0A087WSY4 118 aa19.81■□□□□ 0.76
LSM4-201ENST00000252816 FAM171A2A8MVW0 826 aa19.81■□□□□ 0.76
LSM4-201ENST00000252816 H7C1C5 153 aa19.81■□□□□ 0.76
LSM4-201ENST00000252816 GPRIN2O60269 458 aa19.81■□□□□ 0.76
LSM4-201ENST00000252816 MMP7P09237 267 aaPredicted RBP19.81■□□□□ 0.76
LSM4-201ENST00000252816 EFNA4P52798 201 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms