RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 AKAIN1P0CW23 69 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 NAT2P11245 290 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 CBR1P16152 277 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 C5AR1P21730 350 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 SLC2A5P22732 501 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 ACAA2P42765 397 aaKnown RBP10.87□□□□□ -0.67
USHBP1-201ENST00000252597 GPR143P51810 404 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 UBE2IP63279 158 aaKnown RBP10.87□□□□□ -0.67
USHBP1-201ENST00000252597 RAB11BQ15907 218 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 PRICKLE4Q2TBC4 344 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 ZNF550Q7Z398 422 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 LRRTM1Q86UE6 522 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 MIB2Q96AX9 1013 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 KTI12Q96EK9 354 aaPredicted RBP10.87□□□□□ -0.67
USHBP1-201ENST00000252597 MYADMQ96S97 322 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 KIR3DX1Q9H7L2 352 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 THAP10Q9P2Z0 257 aaPredicted RBP10.87□□□□□ -0.67
USHBP1-201ENST00000252597 UNC13CQ8NB66 2214 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 A0A0B4J2A0 478 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 NAP1L6A6NFF2 107 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 H7C2Y5 167 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 GLCEO94923 617 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 RENP00797 406 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 ITGA5P08648 1049 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 ST6GAL1P15907 406 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 AKR1C3P42330 323 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 SLC22A6Q4U2R8 563 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 COL13A1Q5TAT6 717 aaPredicted RBP10.87□□□□□ -0.67
USHBP1-201ENST00000252597 RGS7BPQ6MZT1 257 aaPredicted RBP10.87□□□□□ -0.67
USHBP1-201ENST00000252597 BAIAP2L2Q6UXY1 529 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 MED25Q71SY5 747 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 GALNT16Q8N428 558 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 OR2G2Q8NGZ5 317 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 PRTFDC1Q9NRG1 225 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 ANKRD10Q9NXR5 420 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 CKLFQ9UBR5 152 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 SHPKQ9UHJ6 478 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 DHDHQ9UQ10 334 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 SDK2Q58EX2 2172 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 PTPRSQ13332 1948 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 COL6A3P12111 3177 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 GGT3PA6NGU5 568 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 METTL12A8MUP2 240 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 GPRIN2O60269 458 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 KLF8O95600 359 aaPredicted RBP10.87□□□□□ -0.67
USHBP1-201ENST00000252597 IFNA6P05013 189 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 CA3P07451 260 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 GALP22466 123 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 ARFIP1P53367 373 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 ZNF273Q14593 569 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 CBLN2Q8IUK8 224 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 GVQW1Q8N7I0 195 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 OR51A2Q8NGJ7 313 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 SLC25A44Q96H78 314 aaPredicted RBP10.87□□□□□ -0.67
USHBP1-201ENST00000252597 SARGQ9BW04 601 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 TAS2R4Q9NYW5 299 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 ZNF337Q9Y3M9 751 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 KIF26BQ2KJY2 2108 aa10.87□□□□□ -0.67
USHBP1-201ENST00000252597 OR14I1A6ND48 311 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 MFSD2BA6NFX1 497 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 KRBOX1C9JBD0 128 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 PRAMEF2O60811 474 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 RAB40ALP0C0E4 278 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 CXCR1P25024 350 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 TACR3P29371 465 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 EPHA4P54764 986 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 RPL18Q07020 188 aaKnown RBP10.86□□□□□ -0.67
USHBP1-201ENST00000252597 ZNF660Q6AZW8 331 aaPredicted RBP10.86□□□□□ -0.67
USHBP1-201ENST00000252597 SYS1Q8N2H4 156 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 BVESQ8NE79 360 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 BPIFCQ8NFQ6 507 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 C16orf52Q8NHV5 167 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 NUDCD2Q8WVJ2 157 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 RAB40AQ8WXH6 277 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 ELL3Q9HB65 397 aaPredicted RBP10.86□□□□□ -0.67
USHBP1-201ENST00000252597 LHX6Q9UPM6 363 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 POLR1DQ9Y2S0 133 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 HEBP2Q9Y5Z4 205 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 SERINC4A6NH21 518 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 OR5H14A6NHG9 310 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 ZNF736B4DX44 427 aaPredicted RBP10.86□□□□□ -0.67
USHBP1-201ENST00000252597 SCDO00767 359 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 GLSO94925 669 aaPredicted RBP10.86□□□□□ -0.67
USHBP1-201ENST00000252597 FREM3P0C091 2139 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 MAPK3P27361 379 aaPredicted RBP10.86□□□□□ -0.67
USHBP1-201ENST00000252597 OR1D4P47884 311 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 ARRB1P49407 418 aaPredicted RBP10.86□□□□□ -0.67
USHBP1-201ENST00000252597 PRKXP51817 358 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 CD226Q15762 336 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 INO80EQ8NBZ0 244 aaPredicted RBP10.86□□□□□ -0.67
USHBP1-201ENST00000252597 OR10R2Q8NGX6 335 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 GPR119Q8TDV5 335 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 TOE1Q96GM8 510 aaKnown RBP10.86□□□□□ -0.67
USHBP1-201ENST00000252597 WDR92Q96MX6 357 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 NPDC1Q9NQX5 325 aaPredicted RBP10.86□□□□□ -0.67
USHBP1-201ENST00000252597 B9D1Q9UPM9 204 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 A0A1B0GW55 424 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 LINC01553A4QN01 128 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 F8W036 122 aa10.86□□□□□ -0.67
USHBP1-201ENST00000252597 TRIM77I1YAP6 450 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms