RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 PTBP1P26599 531 aaKnown RBP eCLIP14.22□□□□□ -0.136e-9■■□□□ 12.4
LRFN1-201ENST00000248668 ERP29P30040 261 aaKnown RBP14.22□□□□□ -0.13
LRFN1-201ENST00000248668 GZMKP49863 264 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 RPS15P62841 145 aaKnown RBP14.22□□□□□ -0.13
LRFN1-201ENST00000248668 SQSTM1Q13501 440 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 INPP5JQ15735 1006 aaPredicted RBP14.22□□□□□ -0.13
LRFN1-201ENST00000248668 HYAL4Q2M3T9 481 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 FAM69AQ5T7M9 428 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 SLC22A13Q9Y226 551 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 IFITM5A6NNB3 132 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 TACSTD2P09758 323 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 BTCP35070 178 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 CAPZA2P47755 286 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 POLR2HP52434 150 aaKnown RBP14.21□□□□□ -0.13
LRFN1-201ENST00000248668 SLC36A2Q495M3 483 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 PHF19Q5T6S3 580 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 EEF1A1P5Q5VTE0 462 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 TMEM71Q6P5X7 295 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 PAPD4Q6PIY7 484 aaKnown RBP14.21□□□□□ -0.13
LRFN1-201ENST00000248668 ANKRD37Q7Z713 158 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 TMPRSS12Q86WS5 348 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 BEST4Q8NFU0 473 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 OR5M1Q8NGP8 315 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 KLHL15Q96M94 604 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 MOKQ9UQ07 419 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 TRAV8-7A0A075B6U6 113 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 GPRIN2O60269 458 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 EIF4E2O60573 245 aaKnown RBP14.21□□□□□ -0.13
LRFN1-201ENST00000248668 ANKRD34CP0C6C1 535 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 APEHP13798 732 aaKnown RBP14.21□□□□□ -0.13
LRFN1-201ENST00000248668 ALOX5APP20292 161 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 SLC6A1P30531 599 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 FMODQ06828 376 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 PLA2G7Q13093 441 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 OR7A5Q15622 319 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 RHBDD2Q6NTF9 364 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 EID2Q8N6I1 236 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 ZNF441Q8N8Z8 693 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 CCNL2Q96S94 520 aaPredicted RBP14.21□□□□□ -0.13
LRFN1-201ENST00000248668 GAL3ST1Q99999 423 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 MARVELD1Q9BSK0 173 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.21□□□□□ -0.13
LRFN1-201ENST00000248668 KCNK15Q9H427 330 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 ELOVL3Q9HB03 270 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 SPATA2Q9UM82 520 aa14.21□□□□□ -0.13
LRFN1-201ENST00000248668 RALGAPA1Q6GYQ0 2036 aa14.21□□□□□ -0.14
LRFN1-201ENST00000248668 GPR179Q6PRD1 2367 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 AHSA1O95433 338 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 ABHD16AO95870 558 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 ADRA2CP18825 462 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 CTAG1AP78358 180 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 INSM1Q01101 510 aaPredicted RBP14.2□□□□□ -0.14
LRFN1-201ENST00000248668 HSF2Q03933 536 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 LAMTOR1Q6IAA8 161 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 OR7E24Q6IFN5 339 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 STAC2Q6ZMT1 411 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 OVCH1Q7RTY7 1134 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 OR2G2Q8NGZ5 317 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 TMEM106AQ96A25 262 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 PHF21AQ96BD5 680 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 ZC3HAV1LQ96H79 300 aaKnown RBP14.2□□□□□ -0.14
LRFN1-201ENST00000248668 CDX2Q99626 313 aaPredicted RBP14.2□□□□□ -0.14
LRFN1-201ENST00000248668 ABRACLQ9P1F3 81 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 V9GY05 133 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 TO15178 435 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 TXNDC12O95881 172 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 BTN1A1Q13410 526 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 POU4F3Q15319 338 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 FAM199XQ6PEV8 388 aaPredicted RBP14.2□□□□□ -0.14
LRFN1-201ENST00000248668 B9D1Q9UPM9 204 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 EP300Q09472 2414 aaPredicted RBP14.2□□□□□ -0.14
LRFN1-201ENST00000248668 PRSS37A4D1T9 235 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 ITGA10O75578 1167 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 UBL3O95164 117 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 TMIGD3P0DMS9 266 aaPredicted RBP14.2□□□□□ -0.14
LRFN1-201ENST00000248668 FOSL2P15408 326 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 EPHA8P29322 1005 aaPredicted RBP14.2□□□□□ -0.14
LRFN1-201ENST00000248668 RPL27P61353 136 aaKnown RBP14.2□□□□□ -0.14
LRFN1-201ENST00000248668 ADAM8P78325 824 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 GPR139Q6DWJ6 353 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 SFRP4Q6FHJ7 346 aaPredicted RBP14.2□□□□□ -0.14
LRFN1-201ENST00000248668 FAAP20Q6NZ36 180 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 UNQ9370/PRO34162Q6UXP9 181 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 WDFY1Q8IWB7 410 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 PRSS35Q8N3Z0 413 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 TSEN15Q8WW01 171 aaKnown RBP14.2□□□□□ -0.14
LRFN1-201ENST00000248668 MED29Q9NX70 200 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 KLRF1Q9NZS2 232 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 NUP50Q9UKX7 468 aa14.2□□□□□ -0.14
LRFN1-201ENST00000248668 A0A0A6YYJ9 748 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 A8MVM7 634 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 ALOX12BO75342 701 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 FOXK1P85037 733 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 SGCBQ16585 318 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 Q499Y3 187 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 PLA1AQ53H76 456 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 GRINAQ7Z429 371 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 LINC00469Q8N7U9 141 aa14.19□□□□□ -0.14
LRFN1-201ENST00000248668 MAFAQ8NHW3 353 aaPredicted RBP14.19□□□□□ -0.14
LRFN1-201ENST00000248668 SLC25A38Q96DW6 304 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms