RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 FAM32AQ9Y421 112 aaKnown RBP18.27■□□□□ 0.52
HCFC1R1-201ENST00000248089 SH3PXD2BA1X283 911 aa18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 NPIPB13A6NJU9 1138 aa18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 NPIPB4C9JG80 1138 aa18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 GPRIN2O60269 458 aa18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 DCTN3O75935 186 aa18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 F12P00748 615 aaPredicted RBP18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 CSF3P09919 207 aa18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 NR4A1P22736 598 aa18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 CTXN1P60606 82 aa18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 SLC36A2Q495M3 483 aa18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 FGD3Q5JSP0 725 aa18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 ZNF584Q8IVC4 421 aa18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 LRRC18Q8N456 261 aa18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 FAM86B1Q8N7N1 296 aa18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 NMNAT1Q9HAN9 279 aaPredicted RBP18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 DYNLRB1Q9NP97 96 aa18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 ARL8BQ9NVJ2 186 aa18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 TAGLN3Q9UI15 199 aa18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 CMAHPQ9Y471 501 aa18.26■□□□□ 0.51
HCFC1R1-201ENST00000248089 IGHMP01871 453 aa18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 SERPINA5P05154 406 aa18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 H1F0P07305 194 aaKnown RBP18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 ZNF35P13682 527 aa18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 SLC25A16P16260 332 aa18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 CDAP32320 146 aa18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 PPOXP50336 477 aa18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 RPL27P61353 136 aaKnown RBP18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 MXRA7P84157 204 aa18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 TAF11Q15544 211 aa18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 C10orf128Q5T292 105 aa18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 TSEN54Q7Z6J9 526 aaKnown RBP18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 PIGWQ7Z7B1 504 aa18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 RNF113BQ8IZP6 322 aaKnown RBP18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 PGAM4Q8N0Y7 254 aa18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 CLDN22Q8N7P3 220 aa18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 SLC30A7Q8NEW0 376 aa18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 C10orf105Q8TEF2 133 aa18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 TSPAN32Q96QS1 320 aa18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 TNFRSF13CQ96RJ3 184 aa18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 KCNK17Q96T54 332 aa18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 DCAF13Q9NV06 445 aaKnown RBP18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 ZNF346Q9UL40 294 aaKnown RBP18.25■□□□□ 0.51
HCFC1R1-201ENST00000248089 SONP18583 2426 aaKnown RBP18.24■□□□□ 0.51
HCFC1R1-201ENST00000248089 DIRAS1O95057 198 aa18.24■□□□□ 0.51
HCFC1R1-201ENST00000248089 NR2C1P13056 603 aa18.24■□□□□ 0.51
HCFC1R1-201ENST00000248089 RPL4P36578 427 aaKnown RBP18.24■□□□□ 0.51
HCFC1R1-201ENST00000248089 SLC9A3P48764 834 aa18.24■□□□□ 0.51
HCFC1R1-201ENST00000248089 PDLIM4P50479 330 aa18.24■□□□□ 0.51
HCFC1R1-201ENST00000248089 DPPA2Q7Z7J5 298 aa18.24■□□□□ 0.51
HCFC1R1-201ENST00000248089 ZCCHC24Q8N2G6 241 aaKnown RBP18.24■□□□□ 0.51
HCFC1R1-201ENST00000248089 FAM46AQ96IP4 442 aaKnown RBP18.24■□□□□ 0.51
HCFC1R1-201ENST00000248089 RAB1BQ9H0U4 201 aa18.24■□□□□ 0.51
HCFC1R1-201ENST00000248089 ANKRD19PQ9H560 264 aa18.24■□□□□ 0.51
HCFC1R1-201ENST00000248089 NDUFAF4Q9P032 175 aa18.24■□□□□ 0.51
HCFC1R1-201ENST00000248089 SLC7A8Q9UHI5 535 aa18.24■□□□□ 0.51
HCFC1R1-201ENST00000248089 MAGEL2Q9UJ55 1249 aa18.24■□□□□ 0.51
HCFC1R1-201ENST00000248089 YLPM1P49750 1951 aaKnown RBP18.24■□□□□ 0.51
HCFC1R1-201ENST00000248089 A0A096LNT2 108 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 IGKV1D-43A0A0B4J1Z2 117 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 CDC42EP2O14613 210 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 ERCC1P07992 297 aaPredicted RBP18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 CCL2P13500 99 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 MSX2P35548 267 aaPredicted RBP18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 ZNF133P52736 654 aaPredicted RBP18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 RPS23P62266 143 aaKnown RBP18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 FHL1Q13642 323 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 SGCAQ16586 387 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 ANKDD1AQ495B1 522 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 NRN1LQ496H8 165 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 SAMD4BQ5PRF9 694 aaKnown RBP18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 FAM205BPQ63HN1 556 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 PODNL1Q6PEZ8 512 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 LRRC75AQ8NAA5 344 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 SLC7A13Q8TCU3 470 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 DOK1Q99704 481 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 SYT3Q9BQG1 590 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 ALG12Q9BV10 488 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 MRPL37Q9BZE1 423 aaKnown RBP18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 KCNN2Q9H2S1 579 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 OR51B6Q9H340 312 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 SMURF2Q9HAU4 748 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 CDH20Q9HBT6 801 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 CCNB1IP1Q9NPC3 277 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 FBXO9Q9UK97 447 aaPredicted RBP18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 FZR1Q9UM11 496 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 TMEM5Q9Y2B1 443 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 UGT2A1Q9Y4X1 527 aa18.23■□□□□ 0.51
HCFC1R1-201ENST00000248089 IQCMA0A1B0GVH7 501 aa18.22■□□□□ 0.51
HCFC1R1-201ENST00000248089 TMEM129A0AVI4 362 aa18.22■□□□□ 0.51
HCFC1R1-201ENST00000248089 A6NIZ1 184 aa18.22■□□□□ 0.51
HCFC1R1-201ENST00000248089 H7C1C5 153 aa18.22■□□□□ 0.51
HCFC1R1-201ENST00000248089 ADRA2AP08913 450 aa18.22■□□□□ 0.51
HCFC1R1-201ENST00000248089 HSD17B1P14061 328 aa18.22■□□□□ 0.51
HCFC1R1-201ENST00000248089 RHCEP18577 417 aa18.22■□□□□ 0.51
HCFC1R1-201ENST00000248089 GLRXP35754 106 aa18.22■□□□□ 0.51
HCFC1R1-201ENST00000248089 RAP1BP61224 184 aa18.22■□□□□ 0.51
HCFC1R1-201ENST00000248089 LCN6P62502 163 aa18.22■□□□□ 0.51
HCFC1R1-201ENST00000248089 RAP1AP62834 184 aa18.22■□□□□ 0.51
HCFC1R1-201ENST00000248089 ERVK-25P63136 954 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms