RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 WFDC6Q9BQY6 131 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 FNDC11Q9BVV2 318 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 C12orf10Q9HB07 376 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 NDUFAF4Q9P032 175 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 RRP15Q9Y3B9 282 aaKnown RBP11.89□□□□□ -0.51
DDX39A-201ENST00000242776 GRIP1Q9Y3R0 1128 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 LOC105371242A0A075B767 164 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 A0A0B4J2E0 115 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 A0A1B0GWA3 101 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 A0A1B0GX12 115 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 GNGT2O14610 69 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 CHP2O43745 196 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 DEAF1O75398 565 aaPredicted RBP11.89□□□□□ -0.51
DDX39A-201ENST00000242776 SEC14L2O76054 403 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 CST1P01037 141 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 MT-ND1P03886 318 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 PNMTP11086 282 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 EPHA1P21709 976 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 GPR6P46095 362 aaPredicted RBP11.89□□□□□ -0.51
DDX39A-201ENST00000242776 YAP1P46937 504 aaKnown RBP11.89□□□□□ -0.51
DDX39A-201ENST00000242776 CAPZA2P47755 286 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 COMPP49747 757 aaPredicted RBP11.89□□□□□ -0.51
DDX39A-201ENST00000242776 SPIBQ01892 262 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 SNTB2Q13425 540 aaKnown RBP11.89□□□□□ -0.51
DDX39A-201ENST00000242776 ALG10BQ5I7T1 473 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 ULK3Q6PHR2 472 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 OFCC1Q8IZS5 231 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 RNF217Q8TC41 542 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 SLCO4A1Q96BD0 722 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 SLC41A3Q96GZ6 507 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 ANKRD19PQ9H560 264 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 S100A14Q9HCY8 104 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 OBP2BQ9NPH6 170 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 PCDHGB1Q9Y5G3 927 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 VSTM5A8MXK1 200 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 J3KTA2 159 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 TPST2O60704 377 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 TIPRLO75663 272 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 H1F0P07305 194 aaKnown RBP11.88□□□□□ -0.51
DDX39A-201ENST00000242776 MSMBP08118 114 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 SAGP10523 405 aaPredicted RBP11.88□□□□□ -0.51
DDX39A-201ENST00000242776 COL8A2P25067 703 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 FASP25445 335 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 FKBP2P26885 142 aaKnown RBP11.88□□□□□ -0.51
DDX39A-201ENST00000242776 DEFA6Q01524 100 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 ROR2Q01974 943 aaKnown RBP11.88□□□□□ -0.51
DDX39A-201ENST00000242776 PIN1Q13526 163 aaPredicted RBP11.88□□□□□ -0.51
DDX39A-201ENST00000242776 GK3PQ14409 553 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 TRAM2Q15035 370 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 AWAT1Q58HT5 328 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 OR2T5Q6IEZ7 315 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 KDM8Q8N371 416 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 PIK3C3Q8NEB9 887 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 NUP37Q8NFH4 326 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 OR2T29Q8NH02 315 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 FAM216AQ8WUB2 273 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 MPP4Q96JB8 637 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 SYT3Q9BQG1 590 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 NELFAQ9H3P2 528 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 CRLF2Q9HC73 371 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 RIMS3Q9UJD0 308 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 SLC7A7Q9UM01 511 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 FZR1Q9UM11 496 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 A4GNTQ9UNA3 340 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 PKD1L1Q8TDX9 2849 aa11.88□□□□□ -0.51
DDX39A-201ENST00000242776 ARPC4-TTLL3A0A0A6YYG9 625 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 IGHV2OR16-5A0A0B4J2B6 119 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 ZNF503-AS2A6NEH8 195 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 LIPT2A6NK58 231 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 AQP7P3A6NL99 342 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 ZNF208O43345 1280 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 KRT36O76013 467 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 DIRAS1O95057 198 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 GADD45GO95257 159 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 IGLV1-44P01699 117 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 HPXP02790 462 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 CXCR1P25024 350 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 RRM2P31350 389 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 ALDH3B1P43353 468 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 MAP2K6P52564 334 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 ARF1P84077 181 aaKnown RBP11.87□□□□□ -0.51
DDX39A-201ENST00000242776 DAG1Q14118 895 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 MAD2L1BPQ15013 274 aaPredicted RBP11.87□□□□□ -0.51
DDX39A-201ENST00000242776 ELFN2Q5R3F8 820 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 UGT2A3Q6UWM9 527 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 TAPBPLQ9BX59 468 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 ZNF442Q9H7R0 627 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 REEP1Q9H902 201 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 CRNNQ9UBG3 495 aaPredicted RBP11.87□□□□□ -0.51
DDX39A-201ENST00000242776 DNAJB9Q9UBS3 223 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 SPEF1Q9Y4P9 236 aa11.87□□□□□ -0.51
DDX39A-201ENST00000242776 PPIHO43447 177 aaKnown RBP11.86□□□□□ -0.51
DDX39A-201ENST00000242776 PRSS23O95084 383 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 AVPP01185 164 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 ADRA2CP18825 462 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 CDH12P55289 794 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 HILS1P60008 231 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 ATP6AP1Q15904 470 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 MSMPQ1L6U9 139 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 ALKBH6Q3KRA9 238 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms