RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 CHRNB4P30926 498 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 CHN2P52757 468 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 SH3BGRP55822 239 aaPredicted RBP9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 SELENOVP59797 346 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 ARF1P84077 181 aaKnown RBP9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 EIF2B1Q14232 305 aaKnown RBP9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF770Q6IQ21 691 aaPredicted RBP9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 STEAP2Q8NFT2 490 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 TFAP2CQ92754 450 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 SURF4O15260 269 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 ENTPD6O75354 484 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 GLCEO94923 617 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 APOC1P02654 83 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 B4GALT1P15291 398 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 SLC35D3Q5M8T2 416 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 ARMC4Q5T2S8 1044 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 PLEKHG7Q6ZR37 379 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 LIX1LQ8IVB5 337 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF511Q8NB15 262 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 TAS2R16Q9NYV7 291 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 B9D1Q9UPM9 204 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 SPEF1Q9Y4P9 236 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF593O00488 134 aaPredicted RBP9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 RAMP1O60894 148 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 TIMP3P35625 211 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 CA7P43166 264 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 GDI2P50395 445 aaKnown RBP9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 CDK5Q00535 292 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 TMED1Q13445 227 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 MED22Q15528 200 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 RIPPLY2Q5TAB7 128 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 TSPO2Q5TGU0 170 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 ACBD7Q8N6N7 88 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 OR8D4Q8NGM9 314 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 RORBQ92753 470 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 RSPO3Q9BXY4 272 aaPredicted RBP9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 TTTY10Q9BZA0 68 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 OPN3Q9H1Y3 402 aaPredicted RBP9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 SP140LQ9H930 580 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 HINT3Q9NQE9 182 aaKnown RBP9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 TLN1Q9Y490 2541 aaKnown RBP9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 LOC102725191A0A1B0GVB3 256 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 SLC22A23A1A5C7 686 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 RPP14O95059 124 aaKnown RBP9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 SPI1P17947 270 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 PSMB9P28065 219 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 EPHA2P29317 976 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 MPGP29372 298 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 AGTR1P30556 359 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 MAD2L1BPQ15013 274 aaPredicted RBP9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 POU4F3Q15319 338 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 GFOD2Q3B7J2 385 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 RBM48Q5RL73 367 aaKnown RBP9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF691Q5VV52 312 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 WFDC8Q8IUA0 241 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 SPTSSAQ969W0 71 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 TMEM80Q96HE8 168 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 REV1Q9UBZ9 1251 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 SLC5A6Q9Y289 635 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 A0A087WXM4 84 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 CDKN2AP42771 156 aaKnown RBP9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 FMODQ06828 376 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 C6orf141Q5SZD1 244 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 NUFIP2Q7Z417 695 aaKnown RBP9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 KLHL36Q8N4N3 616 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 OR52N5Q8NH56 324 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 C1QTNF6Q9BXI9 259 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 CFAP54Q96N23 3096 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 MSTNO14793 375 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 TBX1O43435 398 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 DCKP27707 260 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 GBX2P52951 348 aaPredicted RBP9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 TEKQ02763 1124 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 CTU2Q2VPK5 515 aaKnown RBP9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 B3GLCTQ6Y288 498 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 SLC35F2Q8IXU6 374 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 HDAC2Q92769 488 aaKnown RBP9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 C1orf198Q9H425 327 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 EXOSC4Q9NPD3 245 aaKnown RBP9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 GNG8Q9UK08 70 aa9.87□□□□□ -0.83
TNFAIP3-201ENST00000237289 MAGEA13PA6NCF6 341 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 C16orf97H3BN30 126 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 J3QLW9 94 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 TRAF3IP2O43734 574 aaPredicted RBP9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 XPNPEP2O43895 674 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 ANXA2P07355 339 aaKnown RBP9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 GLI4P10075 376 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF19P17023 458 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 CDK5R2Q13319 367 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 P2RY6Q15077 328 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF610Q8N9Z0 462 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 GJC3Q8NFK1 279 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 ADGRG7Q96K78 797 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 OR2M2Q96R28 347 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 HDHD5Q9BXW7 423 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 EMC7Q9NPA0 242 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 SLC7A10Q9NS82 523 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 NDRG4Q9ULP0 352 aaKnown RBP9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 HEATR5AQ86XA9 2040 aa9.86□□□□□ -0.83
TNFAIP3-201ENST00000237289 F5H5K5 113 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms