RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 OR6C1Q96RD1 312 aa14.56□□□□□ -0.08
UBE3D-201ENST00000237186 WDR77Q9BQA1 342 aaPredicted RBP14.56□□□□□ -0.08
UBE3D-201ENST00000237186 IER2Q9BTL4 223 aa14.56□□□□□ -0.08
UBE3D-201ENST00000237186 GON7Q9BXV9 100 aa14.56□□□□□ -0.08
UBE3D-201ENST00000237186 OR11A1Q9GZK7 315 aa14.56□□□□□ -0.08
UBE3D-201ENST00000237186 NAP1L6A6NFF2 107 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 TTLL8A6PVC2 850 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 ZNF208O43345 1280 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 TIAF1O95411 115 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 ART1P52961 327 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 FBXW4P57775 412 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 FOXL2P58012 376 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 AP3S2P59780 193 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 WDR38Q5JTN6 314 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 LYSMD4Q5XG99 296 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 KCTD18Q6PI47 426 aaPredicted RBP14.55□□□□□ -0.08
UBE3D-201ENST00000237186 C16orf47Q6ZP98 133 aaPredicted RBP14.55□□□□□ -0.08
UBE3D-201ENST00000237186 DNM1P46Q6ZS02 220 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 UTS2BQ765I0 119 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 ZNF248Q8NDW4 579 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 OR5L2Q8NGL0 311 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 MAFAQ8NHW3 353 aaPredicted RBP14.55□□□□□ -0.08
UBE3D-201ENST00000237186 SYNPRQ8TBG9 265 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 TMEM106AQ96A25 262 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 AUNIPQ9H7T9 357 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 PLSCR3Q9NRY6 295 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 KLHL9Q9P2J3 617 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 UNC13CQ8NB66 2214 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 ARID1BQ8NFD5 2236 aaPredicted RBP14.55□□□□□ -0.08
UBE3D-201ENST00000237186 RP1P56715 2156 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 TRAV6A0A075B6T7 132 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 TRAV8-7A0A075B6U6 113 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 IGHV5-10-1A0A0J9YXX1 117 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 A6NIZ1 184 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 MS4A18H0YCH9 400 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 SCRG1O75711 98 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 HLA-DQA2P01906 255 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 PTGS2P35354 604 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 CLDN12P56749 244 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 RAP1BP61224 184 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 RAP1AP62834 184 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 PUDPQ08623 228 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 MS4A18Q3C1V0 323 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 STPG1Q5TH74 334 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 CD276Q5ZPR3 534 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 LINGO2Q7L985 606 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 IZUMO1Q8IYV9 350 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 OR10AC1Q8NH08 325 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 OR56B4Q8NH76 319 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 NXPE2Q96DL1 559 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 DNAJA3Q96EY1 480 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 MED28Q9H204 178 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 FANCFQ9NPI8 374 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 ING1Q9UK53 422 aaPredicted RBP14.55□□□□□ -0.08
UBE3D-201ENST00000237186 RARRES3Q9UL19 164 aa14.55□□□□□ -0.08
UBE3D-201ENST00000237186 MPDZO75970 2070 aa14.54□□□□□ -0.08
UBE3D-201ENST00000237186 EML5Q05BV3 1969 aa14.54□□□□□ -0.08
UBE3D-201ENST00000237186 KRT33AO76009 404 aa14.54□□□□□ -0.08
UBE3D-201ENST00000237186 CYC1P08574 325 aa14.54□□□□□ -0.08
UBE3D-201ENST00000237186 H2AFB2P0C5Z0 115 aa14.54□□□□□ -0.08
UBE3D-201ENST00000237186 MSX1P28360 303 aa14.54□□□□□ -0.08
UBE3D-201ENST00000237186 EMP2P54851 167 aa14.54□□□□□ -0.08
UBE3D-201ENST00000237186 GLO1Q04760 184 aa14.54□□□□□ -0.08
UBE3D-201ENST00000237186 FCN2Q15485 313 aa14.54□□□□□ -0.08
UBE3D-201ENST00000237186 PCK2Q16822 640 aa14.54□□□□□ -0.08
UBE3D-201ENST00000237186 GSG1Q2KHT4 349 aa14.54□□□□□ -0.08
UBE3D-201ENST00000237186 SLC25A53Q5H9E4 307 aa14.54□□□□□ -0.08
UBE3D-201ENST00000237186 PAPD4Q6PIY7 484 aaKnown RBP14.54□□□□□ -0.08
UBE3D-201ENST00000237186 LRRC69Q6ZNQ3 347 aa14.54□□□□□ -0.08
UBE3D-201ENST00000237186 OR51A4Q8NGJ6 313 aa14.54□□□□□ -0.08
UBE3D-201ENST00000237186 OR52I2Q8NH67 350 aa14.54□□□□□ -0.08
UBE3D-201ENST00000237186 SLC26A1Q9H2B4 701 aa14.54□□□□□ -0.08
UBE3D-201ENST00000237186 EMC3Q9P0I2 261 aa14.54□□□□□ -0.08
UBE3D-201ENST00000237186 STEAP1Q9UHE8 339 aa14.54□□□□□ -0.08
UBE3D-201ENST00000237186 CABIN1Q9Y6J0 2220 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 IGLV3-32A0A0A0MS00 114 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 CPED1A4D0V7 1026 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 ANXA2P2A6NMY6 339 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 ANXA2P07355 339 aaKnown RBP14.53□□□□□ -0.08
UBE3D-201ENST00000237186 STOMP27105 288 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 CCR6P51684 374 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 CCL7P80098 99 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 RNASE12Q5GAN4 147 aaKnown RBP14.53□□□□□ -0.08
UBE3D-201ENST00000237186 ELFN2Q5R3F8 820 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 TMEM205Q6UW68 189 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 H1FNTQ75WM6 255 aaPredicted RBP14.53□□□□□ -0.08
UBE3D-201ENST00000237186 TMPRSS12Q86WS5 348 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 FCAMRQ8WWV6 532 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 ASB10Q8WXI3 467 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 HYLS1Q96M11 299 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 MESP1Q9BRJ9 268 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 POTEKPQ9BYX7 375 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 OR51J1Q9H342 316 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 HRASLSQ9HDD0 168 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 EMC7Q9NPA0 242 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 FER1L5A0AVI2 2057 aa14.53□□□□□ -0.08
UBE3D-201ENST00000237186 ACOT7O00154 380 aa14.52□□□□□ -0.08
UBE3D-201ENST00000237186 SIGLEC6O43699 453 aa14.52□□□□□ -0.08
UBE3D-201ENST00000237186 CD37P11049 281 aa14.52□□□□□ -0.08
UBE3D-201ENST00000237186 CDK2P24941 298 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms