RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 C5orf34Q96MH7 638 aa13.28□□□□□ -0.28
PRDM4-201ENST00000228437 NPDC1Q9NQX5 325 aaPredicted RBP13.28□□□□□ -0.28
PRDM4-201ENST00000228437 OR6C76A6NM76 312 aa13.27□□□□□ -0.28
PRDM4-201ENST00000228437 H7C1Q1 480 aa13.27□□□□□ -0.28
PRDM4-201ENST00000228437 HPP00738 406 aa13.27□□□□□ -0.28
PRDM4-201ENST00000228437 THY1P04216 161 aa13.27□□□□□ -0.28
PRDM4-201ENST00000228437 RHOP08100 348 aa13.27□□□□□ -0.28
PRDM4-201ENST00000228437 S1PR1P21453 382 aa13.27□□□□□ -0.28
PRDM4-201ENST00000228437 NPY4RP50391 375 aa13.27□□□□□ -0.28
PRDM4-201ENST00000228437 ELAVL1Q15717 326 aaKnown RBP13.27□□□□□ -0.28
PRDM4-201ENST00000228437 NRSN1Q8IZ57 195 aa13.27□□□□□ -0.28
PRDM4-201ENST00000228437 CSNK1A1LQ8N752 337 aa13.27□□□□□ -0.28
PRDM4-201ENST00000228437 CDRT4Q8N9R6 151 aa13.27□□□□□ -0.28
PRDM4-201ENST00000228437 HHIPL1Q96JK4 782 aa13.27□□□□□ -0.28
PRDM4-201ENST00000228437 SLC41A2Q96JW4 573 aa13.27□□□□□ -0.28
PRDM4-201ENST00000228437 FAM83CQ9BQN1 747 aa13.27□□□□□ -0.28
PRDM4-201ENST00000228437 C2orf42Q9NWW7 574 aa13.27□□□□□ -0.28
PRDM4-201ENST00000228437 RNF186Q9NXI6 227 aa13.27□□□□□ -0.28
PRDM4-201ENST00000228437 LHX6Q9UPM6 363 aa13.27□□□□□ -0.28
PRDM4-201ENST00000228437 SOX1O00570 391 aaPredicted RBP13.27□□□□□ -0.29
PRDM4-201ENST00000228437 PIN1P1O15428 100 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 BCL2L11O43521 198 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 EIF3GO75821 320 aaKnown RBP eCLIP13.27□□□□□ -0.29
PRDM4-201ENST00000228437 AQP8O94778 261 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 CPN1P15169 458 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 NDUFA6P56556 154 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 PPIAP62937 165 aaKnown RBP13.27□□□□□ -0.29
PRDM4-201ENST00000228437 ACSM1Q08AH1 577 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 SRSF5Q13243 272 aaKnown RBP13.27□□□□□ -0.29
PRDM4-201ENST00000228437 TCEAL8Q8IYN2 117 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 LINC00469Q8N7U9 141 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 OR6K3Q8NGY3 331 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 DMRTA2Q96SC8 542 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 Q9N2J8 555 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 A0A0A6YYD5 115 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 H7C417 338 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 TMEM64Q6YI46 380 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 RASGRP3Q8IV61 690 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 GALNT16Q8N428 558 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 OR2A1Q8NGT9 310 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 ST6GALNAC5Q9BVH7 336 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 RNF208Q9H0X6 261 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 FN3KRPQ9HA64 309 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.27□□□□□ -0.29
PRDM4-201ENST00000228437 MTFP1Q9UDX5 166 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 HCFC2Q9Y5Z7 792 aa13.27□□□□□ -0.29
PRDM4-201ENST00000228437 BPTFQ12830 3046 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 GALR3O60755 368 aaPredicted RBP13.26□□□□□ -0.29
PRDM4-201ENST00000228437 ABLIM3O94929 683 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 GP1BAP07359 652 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 ERCC1P07992 297 aaPredicted RBP13.26□□□□□ -0.29
PRDM4-201ENST00000228437 MAOAP21397 527 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 DIO1P49895 249 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 EMDP50402 254 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 ZNF674Q2M3X9 581 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 ZNF542PQ5EBM4 170 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 HLA-DQA1Q5Y7H0 255 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 BAP18Q8IXM2 172 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 ZNF679Q8IYX0 411 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 KDM8Q8N371 416 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 FRMD1Q8N878 549 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 SEMA6DQ8NFY4 1073 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 SLC19A3Q9BZV2 496 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 LHX9Q9NQ69 397 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 ST6GALNAC2Q9UJ37 374 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 MRPS33Q9Y291 106 aaKnown RBP13.26□□□□□ -0.29
PRDM4-201ENST00000228437 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.26□□□□□ -0.29
PRDM4-201ENST00000228437 EFCAB7A8K855 629 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 STK17BO94768 372 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 OR2F2O95006 317 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 MPIG6BO95866 241 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 NR0B1P51843 470 aaKnown RBP13.26□□□□□ -0.29
PRDM4-201ENST00000228437 SP3Q02447 781 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 OR2F1Q13607 317 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 ELFN2Q5R3F8 820 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 NUDT18Q6ZVK8 323 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 ZAR1Q86SH2 424 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 C12orf76Q8N812 135 aaPredicted RBP13.26□□□□□ -0.29
PRDM4-201ENST00000228437 OR10H5Q8NGA6 315 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 NECAB3Q96P71 396 aaPredicted RBP13.26□□□□□ -0.29
PRDM4-201ENST00000228437 SEC61A2Q9H9S3 476 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 SMCO4Q9NRQ5 59 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 ZNF701Q9NV72 531 aaPredicted RBP13.26□□□□□ -0.29
PRDM4-201ENST00000228437 DOCK6Q96HP0 2047 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 METTL12A8MUP2 240 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 RDH16O75452 317 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 OR13C7P0DN81 318 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 CAMLGP49069 296 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 GPR143P51810 404 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 CHAF1BQ13112 559 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 GPR18Q14330 331 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 C14orf28Q4W4Y0 310 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 MCATQ8IVS2 390 aaKnown RBP13.26□□□□□ -0.29
PRDM4-201ENST00000228437 CD99L2Q8TCZ2 262 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 DEFB118Q96PH6 123 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 RASL12Q9NYN1 266 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 ZNF223Q9UK11 482 aaPredicted RBP13.26□□□□□ -0.29
PRDM4-201ENST00000228437 ADAM29Q9UKF5 820 aa13.26□□□□□ -0.29
PRDM4-201ENST00000228437 CCDC163A0A0D9SF12 145 aa13.25□□□□□ -0.29
PRDM4-201ENST00000228437 HCRTR2O43614 444 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms