RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 GRB2P62993 217 aaKnown RBP16.88■□□□□ 0.29
CLIP2-201ENST00000223398 HNF4GQ14541 408 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 SPRED2Q7Z698 418 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 GTPBP8Q8N3Z3 284 aaPredicted RBP16.88■□□□□ 0.29
CLIP2-201ENST00000223398 TAAR8Q969N4 342 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 SLC22A11Q9NSA0 550 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 GABRA5P31644 462 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 C1orf53Q5VUE5 145 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 DTWD2Q8NBA8 298 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 OR52I1Q8NGK6 324 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 UBE2FQ969M7 185 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 TIMD4Q96H15 378 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 MRGPRX3Q96LB0 322 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 LAT2Q9GZY6 243 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 SDHAF2Q9NX18 166 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 C5orf49A4QMS7 147 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 DPM1O60762 260 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 IGFBP1P08833 259 aaPredicted RBP16.87■□□□□ 0.29
CLIP2-201ENST00000223398 SPCS2Q15005 226 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 VASH2Q86V25 355 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 TSNAXQ99598 290 aaKnown RBP16.87■□□□□ 0.29
CLIP2-201ENST00000223398 TMEM100Q9NV29 134 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 ZNF346Q9UL40 294 aaKnown RBP16.87■□□□□ 0.29
CLIP2-201ENST00000223398 NOTOA8MTQ0 251 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 FOLR1P15328 257 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 MAP2K6P52564 334 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 NHSL2Q5HYW2 709 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 LRRC28Q86X40 367 aaPredicted RBP16.87■□□□□ 0.29
CLIP2-201ENST00000223398 ZNF679Q8IYX0 411 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 KCNG3Q8TAE7 436 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 GAB3Q8WWW8 586 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 SGK3Q96BR1 496 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 BCL7BQ9BQE9 202 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 PPA2Q9H2U2 334 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 AGPAT2O15120 278 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 HLA-AP01891 365 aaKnown RBP16.87■□□□□ 0.29
CLIP2-201ENST00000223398 ELP2Q6IA86 826 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 ANKRD53Q8N9V6 530 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 OR5M11Q96RB7 305 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 LIN7BQ9HAP6 207 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 DOCK1Q14185 1865 aa16.87■□□□□ 0.29
CLIP2-201ENST00000223398 TNFRSF10AO00220 468 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 LILRB5O75023 590 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 TAS2R46P59540 309 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 CATR1Q13166 79 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 ADPRMQ3LIE5 342 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 GLYATL3Q5SZD4 288 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 MSI2Q96DH6 328 aaKnown RBP16.86■□□□□ 0.29
CLIP2-201ENST00000223398 NAA50Q9GZZ1 169 aaKnown RBP16.86■□□□□ 0.29
CLIP2-201ENST00000223398 NDRG3Q9UGV2 375 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 ZNF195O14628 629 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 UPK1BO75841 260 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 TNFSF8P32971 234 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 OR1C1Q15619 314 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 SLC22A24Q8N4F4 322 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 ELMOD3Q96FG2 381 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 TNFRSF12AQ9NP84 129 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 STRCP1A6NGW2 1772 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 IGHV5-51A0A0C4DH38 117 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 TSPAN11A1L157 253 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 SLC22A20A6NK97 555 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 ZNF732B4DXR9 585 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 TBXA2RP21731 343 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 SNCAP37840 140 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 GPR119Q8TDV5 335 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 MAFIPQ8WZ33 124 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 OR5B12Q96R08 314 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 CGGBP1Q9UFW8 167 aaPredicted RBP16.86■□□□□ 0.29
CLIP2-201ENST00000223398 PSORS1C1Q9UIG5 152 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 CRYAAP02489 173 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 PIPP12273 146 aaPredicted RBP16.86■□□□□ 0.29
CLIP2-201ENST00000223398 SEMA6DQ8NFY4 1073 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 NKX3-1Q99801 234 aaPredicted RBP16.86■□□□□ 0.29
CLIP2-201ENST00000223398 GALNT9Q9HCQ5 603 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 PMS2P1A4D2B8 440 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 VAMP5O95183 116 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 SLC2A10O95528 541 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 RAB40ALP0C0E4 278 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 SPRED1Q7Z699 444 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 RAB40AQ8WXH6 277 aa16.86■□□□□ 0.29
CLIP2-201ENST00000223398 ZNF71Q9NQZ8 489 aaPredicted RBP16.86■□□□□ 0.29
CLIP2-201ENST00000223398 NDRG4Q9ULP0 352 aaKnown RBP16.86■□□□□ 0.29
CLIP2-201ENST00000223398 SHISA8B8ZZ34 492 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 PAN3Q58A45 887 aaKnown RBP16.85■□□□□ 0.29
CLIP2-201ENST00000223398 GLIPR1L1Q6UWM5 242 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 PDCD1LG2Q9BQ51 273 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 GHRLQ9UBU3 117 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 PAHP00439 452 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 IL1AP01583 271 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 RPS27P42677 84 aaKnown RBP16.85■□□□□ 0.29
CLIP2-201ENST00000223398 HOXA1P49639 335 aaPredicted RBP16.85■□□□□ 0.29
CLIP2-201ENST00000223398 PRSS36Q5K4E3 855 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 ZNF468Q5VIY5 522 aaPredicted RBP16.85■□□□□ 0.29
CLIP2-201ENST00000223398 CLEC2DQ9UHP7 191 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 HIST1H1CP16403 213 aaKnown RBP16.85■□□□□ 0.29
CLIP2-201ENST00000223398 YBX1P67809 324 aaKnown RBP16.85■□□□□ 0.29
CLIP2-201ENST00000223398 MSMO1Q15800 293 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 HES3Q5TGS1 186 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 DESI1Q6ICB0 168 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 NLRP8Q86W28 1048 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms