RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 FOXC2Q99958 501 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 ALG12Q9BV10 488 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 CHID1Q9BWS9 393 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 BEX4Q9NWD9 120 aaPredicted RBP11.03□□□□□ -0.64
LSM5-201ENST00000223084 STX18Q9P2W9 335 aaKnown RBP11.03□□□□□ -0.64
LSM5-201ENST00000223084 CRNNQ9UBG3 495 aaPredicted RBP11.03□□□□□ -0.64
LSM5-201ENST00000223084 GRHPRQ9UBQ7 328 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 SLC7A8Q9UHI5 535 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 IER3IP1Q9Y5U9 82 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 U3KQV3 271 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 F8P00451 2351 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 DHRS12A0PJE2 317 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 A6NIZ1 184 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 IMPA2O14732 288 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 SMPD2O60906 423 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 CCNB2O95067 398 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 IGKV3-15P01624 115 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 OR8G3PP0DMU2 310 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 RAP2AP10114 183 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 FPR3P25089 353 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 GIPRP48546 466 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 GSSP48637 474 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 PTDSS1P48651 473 aaKnown RBP11.02□□□□□ -0.65
LSM5-201ENST00000223084 ZNF84P51523 738 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 ZNF133P52736 654 aaPredicted RBP11.02□□□□□ -0.65
LSM5-201ENST00000223084 RAP1BP61224 184 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 RAP1AP62834 184 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 NAAAQ02083 359 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 MESTQ5EB52 335 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 C10orf128Q5T292 105 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 FAM205BPQ63HN1 556 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 C1orf94Q6P1W5 598 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 SLC25A47Q6Q0C1 308 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 SMARCD3Q6STE5 483 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 CCDC36Q8IYA8 594 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 DEPDC4Q8N2C3 294 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 FANK1Q8TC84 345 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 PIGTQ969N2 578 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 GTPBP3Q969Y2 492 aaKnown RBP11.02□□□□□ -0.65
LSM5-201ENST00000223084 PERPQ96FX8 193 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 ZNF75AQ96N20 296 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 ZNF570Q96NI8 536 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 RBP7Q96R05 134 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 KCNS3Q9BQ31 491 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 CXXC4Q9H2H0 198 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 NRIP3Q9NQ35 241 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 SAMHD1Q9Y3Z3 626 aaKnown RBP11.02□□□□□ -0.65
LSM5-201ENST00000223084 UGT2A1Q9Y4X1 527 aa11.02□□□□□ -0.65
LSM5-201ENST00000223084 MAP1AP78559 2803 aaPredicted RBP11.02□□□□□ -0.65
LSM5-201ENST00000223084 SOCS2O14508 198 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 ATP5HO75947 161 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 PPP1R3DO95685 299 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 CST1P01037 141 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 GASTP01350 101 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 CD8AP01732 235 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 ARR3P36575 388 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 IFNGR2P38484 337 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 RASSF2P50749 326 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 FABP6P51161 128 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 RAB1AP62820 205 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 TSPAN31Q12999 210 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 KRR1Q13601 381 aaKnown RBP11.01□□□□□ -0.65
LSM5-201ENST00000223084 RAB39AQ14964 217 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 ETFDHQ16134 617 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 GSG1Q2KHT4 349 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 C3orf36Q3SXR2 165 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 THEM4Q5T1C6 240 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 ZNF770Q6IQ21 691 aaPredicted RBP11.01□□□□□ -0.65
LSM5-201ENST00000223084 DPY19L2P2Q6ZN68 376 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 LRRC18Q8N456 261 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 FAM169BQ8N8A8 192 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 TMEM171Q8WVE6 324 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 NANOS1Q8WY41 292 aaKnown RBP11.01□□□□□ -0.65
LSM5-201ENST00000223084 POP5Q969H6 163 aaKnown RBP11.01□□□□□ -0.65
LSM5-201ENST00000223084 SAMD8Q96LT4 415 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 GPX7Q96SL4 187 aaPredicted RBP11.01□□□□□ -0.65
LSM5-201ENST00000223084 DHRS9Q9BPW9 319 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 NDEL1Q9GZM8 345 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 OR52D1Q9H346 318 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 REEP1Q9H902 201 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 MED13LQ71F56 2210 aa11.01□□□□□ -0.65
LSM5-201ENST00000223084 IGHV2OR16-5A0A0B4J2B6 119 aa11□□□□□ -0.65
LSM5-201ENST00000223084 A0A1W2PPL8 197 aa11□□□□□ -0.65
LSM5-201ENST00000223084 TCRBV3S1A0A5B6 114 aa11□□□□□ -0.65
LSM5-201ENST00000223084 SLC22A23A1A5C7 686 aa11□□□□□ -0.65
LSM5-201ENST00000223084 PRSS37A4D1T9 235 aa11□□□□□ -0.65
LSM5-201ENST00000223084 XKRYO14609 159 aa11□□□□□ -0.65
LSM5-201ENST00000223084 UBL3O95164 117 aa11□□□□□ -0.65
LSM5-201ENST00000223084 FARS2O95363 451 aaKnown RBP11□□□□□ -0.65
LSM5-201ENST00000223084 RAB36O95755 333 aa11□□□□□ -0.65
LSM5-201ENST00000223084 CRYAAP02489 173 aa11□□□□□ -0.65
LSM5-201ENST00000223084 SCG5P05408 212 aa11□□□□□ -0.65
LSM5-201ENST00000223084 ZNF14P17017 642 aaPredicted RBP11□□□□□ -0.65
LSM5-201ENST00000223084 PAX7P23759 505 aa11□□□□□ -0.65
LSM5-201ENST00000223084 SDHAP31040 664 aa11□□□□□ -0.65
LSM5-201ENST00000223084 TTKP33981 857 aa11□□□□□ -0.65
LSM5-201ENST00000223084 CDKN1AP38936 164 aa11□□□□□ -0.65
LSM5-201ENST00000223084 PTH2RP49190 550 aa11□□□□□ -0.65
LSM5-201ENST00000223084 MRPS34P82930 218 aaKnown RBP11□□□□□ -0.65
LSM5-201ENST00000223084 HGFACQ04756 655 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms