RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 FRG2CA6NGY1 282 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 RP2O75695 350 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 SLC22A5O76082 557 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 CLRN1P58418 232 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 RBMS2Q15434 407 aaKnown RBP13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 GSG1Q2KHT4 349 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 LINC00303Q3SY05 128 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 EMC4Q5J8M3 183 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 FAM174AQ8TBP5 190 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 ZNRF4Q8WWF5 429 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 MIB2Q96AX9 1013 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 TMEM41AQ96HV5 264 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 PLEKHA6Q9Y2H5 1048 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 THBS2P35442 1172 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 SLC25A1P53007 311 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 DLX5P56178 289 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 TDGQ13569 410 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 FAM198BQ6UWH4 519 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 DND1Q8IYX4 353 aaKnown RBP13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 ZNF680Q8NEM1 530 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 OR10AC1Q8NH08 325 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 HAVCR1Q96D42 359 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 SLC41A2Q96JW4 573 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 S1PR5Q9H228 398 aa13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 GPN3Q9UHW5 284 aaPredicted RBP13.56□□□□□ -0.24
UBE2D4-201ENST00000222402 TP53BP1Q12888 1972 aaPredicted RBP13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 FAM186AA6NE01 2351 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 DCTN6O00399 190 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 EIF4E2O60573 245 aaKnown RBP13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 SFTPDP35247 375 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 SLC6A9P48067 706 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 UBE2MP61081 183 aaKnown RBP13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 WDR45BQ5MNZ6 344 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 MAMSTRQ6ZN01 415 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 FOXQ1Q9C009 403 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 CRYZL1O95825 349 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 FASLGP48023 281 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 GRK1Q15835 563 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 Q5BKY6 102 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 C16orf47Q6ZP98 133 aaPredicted RBP13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 OR1F2PQ96R84 312 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 SOSTQ9BQB4 213 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 DEFB126Q9BYW3 111 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 FBXL3Q9UKT7 428 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 SLCO1B1Q9Y6L6 691 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 KNTC1P50748 2209 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 A0A1B0GX78 115 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 PRSS37A4D1T9 235 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 MEGF11A6BM72 1044 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 LMO7DNF2Z398 122 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 J3QRE1 110 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 TLX3O43711 291 aaPredicted RBP13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 RAF1P04049 648 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 HCKP08631 526 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 GAAP10253 952 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 SLC37A1P57057 533 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 ARFRP1Q13795 201 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 MESTQ5EB52 335 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 SYT13Q7L8C5 426 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 GRINAQ7Z429 371 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 ARMC10Q8N2F6 343 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 ACBD4Q8NC06 268 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 OR51S1Q8NGJ8 323 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 CCDC74AQ96AQ1 378 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 RNF170Q96K19 258 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 FRRS1LQ9P0K9 344 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 SUSD2Q9UGT4 822 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 B9D1Q9UPM9 204 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 KLHDC2Q9Y2U9 406 aa13.55□□□□□ -0.24
UBE2D4-201ENST00000222402 SYT7O43581 403 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 HPXP02790 462 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 HTR2CP28335 458 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 NUP62P37198 522 aaPredicted RBP13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 EMP2P54851 167 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 RAP2BP61225 183 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 SKP2Q13309 424 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 OPCMLQ14982 345 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 RNASE10Q5GAN6 216 aaKnown RBP13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 LANCL3Q6ZV70 420 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 EID2Q8N6I1 236 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 PTPMT1Q8WUK0 201 aaPredicted RBP13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 SCMH1Q96GD3 660 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 EMC6Q9BV81 110 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 LTBP2Q14767 1821 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 A0A0G2JK05 382 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 METTL12A8MUP2 240 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 MT-ATP6P00846 226 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 CFIP05156 583 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 ANKRD34CP0C6C1 535 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 APEHP13798 732 aaKnown RBP13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 MFSD13AQ14CX5 517 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 PWWP2BQ6NUJ5 590 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 KCTD9Q7L273 389 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 DCXRQ7Z4W1 244 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 ZNF679Q8IYX0 411 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 ZNF615Q8N8J6 731 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 GPR119Q8TDV5 335 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 RNF215Q9Y6U7 377 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 IGHV1OR15-9A0A0B4J2B8 117 aa13.54□□□□□ -0.24
UBE2D4-201ENST00000222402 TRBV11-1A0A0K0K1C0 115 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms