RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 FKRPQ9H9S5 495 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 MMP25Q9NPA2 562 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 MRPL15Q9P015 296 aaKnown RBP9.02□□□□□ -0.97
USP11-201ENST00000218348 LAMA5O15230 3695 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 TCRBV16S1A1N1A0A5B0 115 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 FITM1A5D6W6 292 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 J3QRE1 110 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 HTR3BO95264 441 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 CELA2AP08217 269 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 TFPIP10646 304 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 SLC2A5P22732 501 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 RFX2P48378 723 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 CHAF1BQ13112 559 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 QPRTQ15274 297 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 TMEM44Q2T9K0 475 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 AARDQ4LEZ3 155 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 OR7E24Q6IFN5 339 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 RPL13AP3Q6NVV1 102 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 CARFQ8N187 725 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 POC1BQ8TC44 478 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 PPP1R14AQ96A00 147 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 KLHL15Q96M94 604 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 CBY1Q9Y3M2 126 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 PCDHGB2Q9Y5G2 931 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 PCDHGA1Q9Y5H4 931 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 A3GALT2U3KPV4 340 aa9.02□□□□□ -0.97
USP11-201ENST00000218348 PHF3Q92576 2039 aaKnown RBP9.01□□□□□ -0.97
USP11-201ENST00000218348 TRBV11-1A0A0K0K1C0 115 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 LRP3O75074 770 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 DKK1O94907 266 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 FBXO45P0C2W1 286 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 COX5BP10606 129 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 RIN1Q13671 783 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 AANATQ16613 207 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.01□□□□□ -0.97
USP11-201ENST00000218348 GLYR1Q49A26 553 aaPredicted RBP9.01□□□□□ -0.97
USP11-201ENST00000218348 LINC00114Q6XXX2 140 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 C19orf18Q8NEA5 215 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 HOXB13Q92826 284 aaPredicted RBP9.01□□□□□ -0.97
USP11-201ENST00000218348 PAPOLGQ9BWT3 736 aaKnown RBP9.01□□□□□ -0.97
USP11-201ENST00000218348 ENAMQ9NRM1 1142 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 NCDNQ9UBB6 729 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 NLKQ9UBE8 527 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 IGKV3D-11A0A0A0MRZ8 115 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 IQCMA0A1B0GVH7 501 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 TEX46H3BTG2 121 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 TMEM127O75204 238 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 EIF4EP06730 217 aaKnown RBP9.01□□□□□ -0.97
USP11-201ENST00000218348 PTHLHP12272 177 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 HLA-DOBP13765 273 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 MYL9P24844 172 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 RBM34P42696 430 aaKnown RBP9.01□□□□□ -0.97
USP11-201ENST00000218348 SRP9P49458 86 aaKnown RBP9.01□□□□□ -0.97
USP11-201ENST00000218348 P2RY4P51582 365 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 SCN1BQ07699 218 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 RBMS2Q15434 407 aaKnown RBP9.01□□□□□ -0.97
USP11-201ENST00000218348 SWI5Q1ZZU3 235 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 RNLSQ5VYX0 342 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 PAPD4Q6PIY7 484 aaKnown RBP9.01□□□□□ -0.97
USP11-201ENST00000218348 UBQLNLQ8IYU4 475 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 YIPF7Q8N8F6 280 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 FAM181AQ8N9Y4 354 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 DNAAF1Q8NEP3 725 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 OR1N1Q8NGS0 311 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 ADAMTS18Q8TE60 1221 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 AP3S1Q92572 193 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 SLC41A2Q96JW4 573 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 CCDC74BQ96LY2 380 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 DERL3Q96Q80 235 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 UCK1Q9HA47 277 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 MBD2Q9UBB5 411 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 SUSD2Q9UGT4 822 aa9.01□□□□□ -0.97
USP11-201ENST00000218348 TM4SF5O14894 197 aa9□□□□□ -0.97
USP11-201ENST00000218348 LANCL1O43813 399 aa9□□□□□ -0.97
USP11-201ENST00000218348 MPZL1O95297 269 aa9□□□□□ -0.97
USP11-201ENST00000218348 GP1BBP13224 206 aa9□□□□□ -0.97
USP11-201ENST00000218348 GBX2P52951 348 aaPredicted RBP9□□□□□ -0.97
USP11-201ENST00000218348 NHLH1Q02575 133 aa9□□□□□ -0.97
USP11-201ENST00000218348 HSF2Q03933 536 aa9□□□□□ -0.97
USP11-201ENST00000218348 KRR1Q13601 381 aaKnown RBP9□□□□□ -0.97
USP11-201ENST00000218348 PRAMEF20Q5VT98 475 aa9□□□□□ -0.97
USP11-201ENST00000218348 PAMR1Q6UXH9 720 aa9□□□□□ -0.97
USP11-201ENST00000218348 DPY19L2P2Q6ZN68 376 aa9□□□□□ -0.97
USP11-201ENST00000218348 LINC00299Q6ZSB3 139 aa9□□□□□ -0.97
USP11-201ENST00000218348 COX15Q7KZN9 410 aa9□□□□□ -0.97
USP11-201ENST00000218348 PRSS45Q7RTY3 260 aa9□□□□□ -0.97
USP11-201ENST00000218348 OR6V1Q8N148 313 aa9□□□□□ -0.97
USP11-201ENST00000218348 ZNF671Q8TAW3 534 aa9□□□□□ -0.97
USP11-201ENST00000218348 METTL21AQ8WXB1 218 aa9□□□□□ -0.97
USP11-201ENST00000218348 TSPAN32Q96QS1 320 aa9□□□□□ -0.97
USP11-201ENST00000218348 CRB3Q9BUF7 120 aa9□□□□□ -0.97
USP11-201ENST00000218348 SLC6A15Q9H2J7 730 aa9□□□□□ -0.97
USP11-201ENST00000218348 NRIP3Q9NQ35 241 aa9□□□□□ -0.97
USP11-201ENST00000218348 KLF2Q9Y5W3 355 aaPredicted RBP9□□□□□ -0.97
USP11-201ENST00000218348 CFAP47Q6ZTR5 3102 aa9□□□□□ -0.97
USP11-201ENST00000218348 FRG2CA6NGY1 282 aa9□□□□□ -0.97
USP11-201ENST00000218348 SUSD5O60279 629 aa9□□□□□ -0.97
USP11-201ENST00000218348 EIF1BO60739 113 aaKnown RBP9□□□□□ -0.97
USP11-201ENST00000218348 ATG12O94817 140 aa9□□□□□ -0.97
USP11-201ENST00000218348 CD14P08571 375 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms