RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 SDK2Q58EX2 2172 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 PCSK5Q92824 1860 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 FABP12A6NFH5 140 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 ZNF879B4DU55 563 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 TRAF3IP2O43734 574 aaPredicted RBP12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 GPANK1O95872 356 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 HLA-DQA2P01906 255 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 P04436 131 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 EVX1P49640 407 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 CCR9P51686 369 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 DEFA1P59665 94 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 DEFA3P59666 94 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 H3F3AP84243 136 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 RASGEF1BQ0VAM2 473 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 RIN1Q13671 783 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 ETFDHQ16134 617 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 MDGA2Q7Z553 956 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 SLC22A16Q86VW1 577 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 ZNF679Q8IYX0 411 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 OR2G2Q8NGZ5 317 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 SETD6Q8TBK2 473 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 THEM6Q8WUY1 208 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 RGP1Q92546 391 aaPredicted RBP12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 GNRHR2Q96P88 292 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 IP6K3Q96PC2 410 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 PARD6AQ9NPB6 346 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 MED29Q9NX70 200 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 SLCO1C1Q9NYB5 712 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 FRRS1LQ9P0K9 344 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 COMMD3Q9UBI1 195 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 IKZF2Q9UKS7 526 aa12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 COA3Q9Y2R0 106 aaPredicted RBP12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 MRPS18CQ9Y3D5 142 aaKnown RBP12.8□□□□□ -0.36
RTFDC1-201ENST00000023939 TRBV5-5A0A0J9YX44 114 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 A0A1W2PNR3 127 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 TMEM212A6NML5 194 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 OR4C45A6NMZ5 311 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 NOTOA8MTQ0 251 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 PRR33A8MZF0 331 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 SULT2B1O00204 365 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 PSMD9O00233 223 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 AQP8O94778 261 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 TNFSF15O95150 251 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 RAB3BP20337 219 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 SRD5A2P31213 254 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 BIDP55957 195 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 ADAM8P78325 824 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 SLC17A1Q14916 467 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 HSD17B12Q53GQ0 312 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 CEP78Q5JTW2 689 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 THEM4Q5T1C6 240 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 B3GNTL1Q67FW5 361 aaPredicted RBP12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 KCTD18Q6PI47 426 aaPredicted RBP12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 FAM131AQ6UXB0 335 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 WDFY1Q8IWB7 410 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 OR6X1Q8NH79 312 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 OR5AK2Q8NH90 309 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 RNF128Q8TEB7 428 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 HSD17B8Q92506 261 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 RELTQ969Z4 430 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 DCBLD2Q96PD2 775 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 OR14A2Q96R54 314 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 AMELYQ99218 206 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 PIGQQ9BRB3 760 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 TMEM185BQ9H7F4 350 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 PPP1R3EQ9H7J1 279 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 DKKL1Q9UK85 242 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 RASD1Q9Y272 281 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 OR2M5A3KFT3 312 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 STMND1H3BQB6 276 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 PIN1P1O15428 100 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 DNPH1O43598 174 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 EIF1BO60739 113 aaKnown RBP12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 HPGDSO60760 199 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 PFDN1O60925 122 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 SPARCP09486 303 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 MAPK3P27361 379 aaPredicted RBP12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 APEX1P27695 318 aaKnown RBP12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 CYB561P49447 251 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 RAC1P63000 192 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 MEP1BQ16820 701 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 IDNKQ5T6J7 187 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 ZNF227Q86WZ6 799 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 NSMAFQ92636 917 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 THRSPQ92748 146 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 SLC25A44Q96H78 314 aaPredicted RBP12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 C4orf45Q96LM5 186 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 DERL3Q96Q80 235 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 RBP7Q96R05 134 aa12.79□□□□□ -0.36
RTFDC1-201ENST00000023939 LOC101059948A0A1B0GTJ6 334 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 GJE1A6NN92 205 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 PDCD5O14737 125 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 ZNF254O75437 659 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 RPP14O95059 124 aaKnown RBP12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 VAMP5O95183 116 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 IGHG1P01857 330 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 PGA4P0DJD7 388 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 PGA3P0DJD8 388 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms