RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Polr2hQ923G2 150 aa12.13□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Exosc5Q9CRA8 235 aa12.13□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Snapc3Q9D2C9 407 aa12.13□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Pfn4Q9D6I3 129 aa12.13□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Tmem25Q9DCF1 365 aa12.13□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Arfgap1Q9EPJ9 414 aa12.13□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Klhl1Q9JI74 751 aa12.13□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Olfr1234A2AVK5 314 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Btbd8D3YUB6 377 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 4930595D18RikD3Z642 64 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Ceacam16E9QA28 426 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Mettl7a3G3X9G9 244 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 9330182O14RikJ3QNB2 140 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 H2al1oL7MU04 110 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Gm45902Q3UDN3 361 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Gm5113Q3UGK8 141 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Plpp1Q61469 283 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Tas2r107Q7M725 308 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Ticam1Q80UF7 732 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Tns4Q8BZ33 696 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 ScaiQ8C8N2 606 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Lrrc25Q8K1T1 297 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Tmem242Q8VCR3 140 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Olfr970Q8VFN3 311 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Olfr1346Q8VGH6 313 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Olfr656Q8VGX9 329 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Trappc2Q9CQP2 140 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Q9CRW3 126 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Rab3bQ9CZT8 219 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Olfr930Q9EQ99 308 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Lime1Q9EQR5 269 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Uchl1Q9R0P9 223 aa12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 MyofQ69ZN7 2048 aaKnown RBP12.12□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Alms1Q8K4E0 3251 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Olfr560A0A1B0GSU5 314 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Esp18A8R0V1 91 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Gm13178B1AVU7 408 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Gm4177D3YTX5 305 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Mn1D3YWE6 1297 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Mrap2D3Z1Q2 207 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Psg20E9Q9B4 475 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 H2-M11F6U8V3 335 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Vmn1r127K7N6J5 305 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Vmn1r142K7N6U0 305 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Vmn1r94K7N6X3 305 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Vmn1r115K7N6Y3 295 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Vmn1r159K7N701 305 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Gm8050L7N2E3 205 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 P01638 115 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 ChrndP02716 520 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 S100a6P14069 89 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Ntf3P20181 258 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 MatkP41242 505 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Nkx2-6P43688 289 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Abcd3P55096 659 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 HfeP70387 359 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Coq7P97478 217 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Nxpe2Q3U095 558 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Ccdc177Q3UHB8 706 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Elmod1Q3V1U8 326 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Cd47Q61735 303 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Taf6Q62311 678 aaKnown RBP12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Epha6Q62413 1035 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Tm7sf2Q71KT5 418 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Slc35f2Q7TML3 375 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Olfr1463Q7TQR3 310 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Olfr1349Q7TQV1 317 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Ddhd2Q80Y98 699 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Gper1Q8BMP4 375 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Orai1Q8BWG9 304 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Lsm14aQ8K2F8 462 aaKnown RBP12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Vmn1r32Q8R2D9 302 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Olfr341Q8VGK9 313 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Hrh4Q91ZY2 391 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Edem1Q925U4 652 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Myl9Q9CQ19 172 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Ddx28Q9CWT6 540 aaKnown RBP12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Aaed1Q9D1A0 226 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Rpl22l1Q9D7S7 122 aaKnown RBP12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Nudt22Q9DD16 308 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Znf207Q9JMD0 495 aaKnown RBP12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 HcstQ9QUJ0 79 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Phf3B2RQG2 2025 aaKnown RBP12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Gm28710A0A1B0GR31 962 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Skint9A7TZG3 319 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 4930579F01RikE9Q3L6 325 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Obox6G3X9U1 347 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Vmn1r13G5E8I3 300 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Vmn2r89O35199 507 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Gpld1O70362 837 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Kcnj1O88335 372 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Cops3O88543 423 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Spsb2O88838 264 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Grap2O89100 322 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 CryabP23927 175 aaKnown RBP12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Hsd11b1P50172 292 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Rps11P62281 158 aaKnown RBP12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Nhlh1Q02576 133 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Nr4a2Q06219 598 aa12.11□□□□□ -0.47
Pdlim5-208ENSMUST00000196220 Acvr1bQ61271 505 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 50.4 ms