RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 EFCAB9A8MZ26 197 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 DHHO43323 396 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 NDUFS7O75251 213 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 ENTPD5O75356 428 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 TRMUO75648 421 aaKnown RBP13.05□□□□□ -0.32
PHGDH-231ENST00000641939 BMP4P12644 408 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 RHCEP18577 417 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 MSX2P35548 267 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-231ENST00000641939 CHRNB3Q05901 458 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 TAF11Q15544 211 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 CLEC12BQ2HXU8 276 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 ANKDD1AQ495B1 522 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 SPATS1Q496A3 300 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 ARMC4Q5T2S8 1044 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 TBPL2Q6SJ96 375 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 RRM2BQ7LG56 351 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 OAFQ86UD1 273 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 MEX3DQ86XN8 651 aaKnown RBP13.05□□□□□ -0.32
PHGDH-231ENST00000641939 DEFB107AQ8IZN7 70 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 CIARTQ8N365 385 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-231ENST00000641939 FAM86B1Q8N7N1 296 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 SYT14Q8NB59 555 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 SLC7A13Q8TCU3 470 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 MCHR2Q969V1 340 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 C7orf34Q96L11 122 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 ZNF347Q96SE7 839 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 SEPHS2Q99611 448 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 GSX1Q9H4S2 264 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-231ENST00000641939 BARX1Q9HBU1 254 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-231ENST00000641939 NOX3Q9HBY0 568 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 CA10Q9NS85 328 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 ZNF224Q9NZL3 707 aa13.05□□□□□ -0.32
PHGDH-231ENST00000641939 GDF2Q9UK05 429 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-231ENST00000641939 TRAV27A0A087WT01 109 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 A0A1W2PRQ8 180 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 hCG_2039718K7EN88 272 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 ARPC2O15144 300 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 UBL3O95164 117 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 FARS2O95363 451 aaKnown RBP13.04□□□□□ -0.32
PHGDH-231ENST00000641939 H1F0P07305 194 aaKnown RBP13.04□□□□□ -0.32
PHGDH-231ENST00000641939 ACVR1BP36896 505 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 GPR4P46093 362 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 GIPRP48546 466 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 SLC9A3P48764 834 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 ZNF84P51523 738 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 RIPPLY3P57055 190 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 CTXN1P60606 82 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 RAB1AP62820 205 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 VLDLRP98155 873 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 MYBPC1Q00872 1141 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 HGFACQ04756 655 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 PIGFQ07326 219 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 DGCR6Q14129 220 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 PODNL1Q6PEZ8 512 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 TMPRSS11FQ6ZWK6 438 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 SKA3Q8IX90 412 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 SLC22A24Q8N4F4 322 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 CCDC197Q8NCU1 140 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 OR51A7Q8NH64 312 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 FBXO17Q96EF6 278 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 PYURFQ96I23 114 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 NSMCE2Q96MF7 247 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 TMEM38BQ9NVV0 291 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 TMEM5Q9Y2B1 443 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 PMF1-BGLAPU3KQ54 211 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 NAV3Q8IVL0 2385 aa13.04□□□□□ -0.32
PHGDH-231ENST00000641939 CHD3Q12873 2000 aaKnown RBP13.04□□□□□ -0.32
PHGDH-231ENST00000641939 CR1P17927 2039 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 ABCA1O95477 2261 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 B2RBV5 119 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 H7C417 338 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 SMAD7O15105 426 aaKnown RBP13.03□□□□□ -0.32
PHGDH-231ENST00000641939 RAB36O95755 333 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 IGHMP01871 453 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 OR8G3PP0DMU2 310 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 ZNF14P17017 642 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-231ENST00000641939 ITGA2P17301 1181 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 SERPINF1P36955 418 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 PTDSS1P48651 473 aaKnown RBP13.03□□□□□ -0.32
PHGDH-231ENST00000641939 ZNF133P52736 654 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-231ENST00000641939 RPL27P61353 136 aaKnown RBP13.03□□□□□ -0.32
PHGDH-231ENST00000641939 TNK1Q13470 666 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 TOP3AQ13472 1001 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-231ENST00000641939 FHL1Q13642 323 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 RAB35Q15286 201 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 SWI5Q1ZZU3 235 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 MST1LQ2TV78 715 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 NRN1LQ496H8 165 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 FGD3Q5JSP0 725 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 C10orf128Q5T292 105 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 VHLLQ6RSH7 139 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 LRRC75AQ8NAA5 344 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 NUP37Q8NFH4 326 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 OR4K5Q8NGD3 323 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 OR13C2Q8NGS9 318 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 HDAC2Q92769 488 aaKnown RBP13.03□□□□□ -0.32
PHGDH-231ENST00000641939 MS4A3Q96HJ5 214 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 NSL1Q96IY1 281 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 ZNF75AQ96N20 296 aa13.03□□□□□ -0.32
PHGDH-231ENST00000641939 TNFRSF13CQ96RJ3 184 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms