RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ARHGAP40Q5TG30 622 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 TMEM65Q6PI78 240 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 FBXO46Q6PJ61 603 aaPredicted RBP13.24□□□□□ -0.29
SCARB2-221ENST00000640341 TMEM184AQ6ZMB5 413 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 BOLLQ8N9W6 283 aaKnown RBP13.24□□□□□ -0.29
SCARB2-221ENST00000640341 GPR148Q8TDV2 347 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 TTC9Q92623 222 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 RBPMSQ93062 196 aaKnown RBP13.24□□□□□ -0.29
SCARB2-221ENST00000640341 MICU1Q9BPX6 476 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 MS4A7Q9GZW8 240 aaPredicted RBP13.24□□□□□ -0.29
SCARB2-221ENST00000640341 ZCCHC4Q9H5U6 513 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 PIPOXQ9P0Z9 390 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 CGGBP1Q9UFW8 167 aaPredicted RBP13.24□□□□□ -0.29
SCARB2-221ENST00000640341 UNC13CQ8NB66 2214 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 DENND4AQ7Z401 1863 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 TCRBV16S1A1N1A0A5B0 115 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 B8ZZF3 427 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 ZNF264O43296 627 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 SLC16A7O60669 478 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 PRAF2O60831 178 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 RAB40ALP0C0E4 278 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 ACSM4P0C7M7 580 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 GABRG2P18507 467 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 MAPK3P27361 379 aaPredicted RBP13.23□□□□□ -0.29
SCARB2-221ENST00000640341 FNTBP49356 437 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 UBE2IP63279 158 aaKnown RBP13.23□□□□□ -0.29
SCARB2-221ENST00000640341 ZP2Q05996 745 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 DCAF12L2Q5VW00 463 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 B3GNTL1Q67FW5 361 aaPredicted RBP13.23□□□□□ -0.29
SCARB2-221ENST00000640341 MARCH3Q86UD3 253 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 RAB40AQ8WXH6 277 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 INTS14Q96SY0 518 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 SLC38A3Q99624 504 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 NMNAT2Q9BZQ4 307 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 UBQLN4Q9NRR5 601 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 PTTG3PQ9NZH4 202 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 FBXL2Q9UKC9 423 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 EIF1AYO14602 144 aaKnown RBP13.23□□□□□ -0.29
SCARB2-221ENST00000640341 TNFRSF10CO14798 259 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 SLC25A12O75746 678 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 UTS2O95399 124 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 ITGA5P08648 1049 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 POU2F2P09086 479 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 IFNGR1P15260 489 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 MST1P26927 711 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 MNDAP41218 407 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 RAG2P55895 527 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 H2BFSP57053 126 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 EIF2B5Q13144 721 aaKnown RBP13.23□□□□□ -0.29
SCARB2-221ENST00000640341 SHHQ15465 462 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 WDR38Q5JTN6 314 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 TMEM205Q6UW68 189 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 ICOSLGO75144 302 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 MAP2K6P52564 334 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 SORDQ00796 357 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 NKPD1Q17RQ9 610 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 BEX5Q5H9J7 111 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 SLC6A19Q695T7 634 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 C17orf107Q6ZR85 190 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 GLRX5Q86SX6 157 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 JAGN1Q8N5M9 183 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 THAP3Q8WTV1 239 aaPredicted RBP13.23□□□□□ -0.29
SCARB2-221ENST00000640341 LINC00052Q96N35 136 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 TAS2R5Q9NYW4 299 aa13.23□□□□□ -0.29
SCARB2-221ENST00000640341 LOC105371267A0A1B0GV96 52 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 NAP1L6A6NFF2 107 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 NPIPB9F8W1W9 429 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 MPZL1O95297 269 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 RRASP10301 218 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 FAUP35544 74 aaKnown RBP13.22□□□□□ -0.29
SCARB2-221ENST00000640341 EIF1AXP47813 144 aaKnown RBP13.22□□□□□ -0.29
SCARB2-221ENST00000640341 NR0B1P51843 470 aaKnown RBP13.22□□□□□ -0.29
SCARB2-221ENST00000640341 PSMD4P55036 377 aaKnown RBP13.22□□□□□ -0.29
SCARB2-221ENST00000640341 Q6ZS52 159 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 MUC20Q8N307 709 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-221ENST00000640341 PRSS35Q8N3Z0 413 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 GPBAR1Q8TDU6 330 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 RNF166Q96A37 237 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-221ENST00000640341 KLHL15Q96M94 604 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 B3GNT4Q9C0J1 378 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 KIR2DS5A0A0G2JLQ3 304 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 A0A0G2JNG1 304 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 OR4C45A6NMZ5 311 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 KIR2DS3K7RE56 304 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 NDUFB6O95139 128 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 ARHGDIBP52566 201 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 HYAL1Q12794 435 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 KIR2DS5Q14953 304 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 LRFN4Q6PJG9 635 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 IDO2Q6ZQW0 420 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 FAM122BQ7Z309 247 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 KRT77Q7Z794 578 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 ATG4DQ86TL0 474 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-221ENST00000640341 CMIPQ8IY22 773 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 RELL2Q8NC24 303 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-221ENST00000640341 OR11A1Q9GZK7 315 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 PRDM9Q9NQV7 894 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 NPDC1Q9NQX5 325 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-221ENST00000640341 DZANK1Q9NVP4 752 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 SHOXO15266 292 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms