RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 OR8U9P0C7N5 309 aa13.2□□□□□ -0.3
SCARB2-216ENST00000639300 CCR9P51686 369 aa13.2□□□□□ -0.3
SCARB2-216ENST00000639300 RPL18Q07020 188 aaKnown RBP13.2□□□□□ -0.3
SCARB2-216ENST00000639300 STEAP1BQ6NZ63 245 aa13.2□□□□□ -0.3
SCARB2-216ENST00000639300 MRPL21Q7Z2W9 205 aaKnown RBP13.2□□□□□ -0.3
SCARB2-216ENST00000639300 STT3BQ8TCJ2 826 aa13.2□□□□□ -0.3
SCARB2-216ENST00000639300 PIGCQ92535 297 aa13.2□□□□□ -0.3
SCARB2-216ENST00000639300 EDAQ92838 391 aa13.2□□□□□ -0.3
SCARB2-216ENST00000639300 C8orf44Q96CB5 159 aa13.2□□□□□ -0.3
SCARB2-216ENST00000639300 NEURL2Q9BR09 285 aa13.2□□□□□ -0.3
SCARB2-216ENST00000639300 FGF20Q9NP95 211 aaPredicted RBP13.2□□□□□ -0.3
SCARB2-216ENST00000639300 A0A087WV62 115 aa13.2□□□□□ -0.3
SCARB2-216ENST00000639300 P2RX6O15547 441 aa13.2□□□□□ -0.3
SCARB2-216ENST00000639300 GABRG2P18507 467 aa13.2□□□□□ -0.3
SCARB2-216ENST00000639300 STEAP2Q8NFT2 490 aa13.2□□□□□ -0.3
SCARB2-216ENST00000639300 LRRC3BQ96PB8 259 aa13.2□□□□□ -0.3
SCARB2-216ENST00000639300 IL20Q9NYY1 176 aa13.2□□□□□ -0.3
SCARB2-216ENST00000639300 EHFQ9NZC4 300 aa13.2□□□□□ -0.3
SCARB2-216ENST00000639300 ZNF346Q9UL40 294 aaKnown RBP13.2□□□□□ -0.3
SCARB2-216ENST00000639300 OTOL1A6NHN0 477 aaPredicted RBP13.19□□□□□ -0.3
SCARB2-216ENST00000639300 SSX5O60225 188 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 HRGP04196 525 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 PPICP45877 212 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 UBE2NP61088 152 aaKnown RBP13.19□□□□□ -0.3
SCARB2-216ENST00000639300 GK2Q14410 553 aaPredicted RBP13.19□□□□□ -0.3
SCARB2-216ENST00000639300 OPCMLQ14982 345 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 SLC35D3Q5M8T2 416 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 Q6ZTK2 550 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 GRINAQ7Z429 371 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 HSD17B8Q92506 261 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 GCDHQ92947 438 aaPredicted RBP13.19□□□□□ -0.3
SCARB2-216ENST00000639300 TMEM43Q9BTV4 400 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 SMIM3Q9BZL3 60 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 C20orf141Q9NUB4 165 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 SPNP16150 400 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 CLDN6P56747 220 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 PCBP4P57723 403 aaKnown RBP13.19□□□□□ -0.3
SCARB2-216ENST00000639300 C12orf73Q69YU5 71 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 LRRC69Q6ZNQ3 347 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 SIRT6Q8N6T7 355 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 FAM174AQ8TBP5 190 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 TMEM59Q9BXS4 323 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 GAREM1Q9H706 876 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 NRXN2Q9P2S2 1712 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 ADAM23O75077 832 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 POU3F2P20265 443 aaPredicted RBP13.19□□□□□ -0.3
SCARB2-216ENST00000639300 HMGA2P52926 109 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 HTR4Q13639 388 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 PHYHIPQ92561 330 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 OR2A14Q96R47 310 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 SEMA4CQ9C0C4 833 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 MRPS2Q9Y399 296 aaKnown RBP13.19□□□□□ -0.3
SCARB2-216ENST00000639300 ZNF175Q9Y473 711 aa13.19□□□□□ -0.3
SCARB2-216ENST00000639300 ALOX12BO75342 701 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 PCBP3P57721 371 aaKnown RBP13.18□□□□□ -0.3
SCARB2-216ENST00000639300 RPL27P61353 136 aaKnown RBP13.18□□□□□ -0.3
SCARB2-216ENST00000639300 SCGB1C1Q8TD33 95 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 WDR34Q96EX3 536 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 SRRQ9GZT4 340 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 OR52A1Q9UKL2 312 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 ICOSLGO75144 302 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 OR7C1O76099 320 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-216ENST00000639300 FAAP20Q6NZ36 180 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 H1FNTQ75WM6 255 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-216ENST00000639300 ZNF845Q96IR2 970 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-216ENST00000639300 FCRL1Q96LA6 429 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 SIRT3Q9NTG7 399 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-216ENST00000639300 SPTY2D1-AS1A0A0U1RR47 76 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 F8W036 122 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 ANXA7P20073 488 aaKnown RBP13.18□□□□□ -0.3
SCARB2-216ENST00000639300 PCMT1P22061 227 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 CAPZBP47756 277 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 MTCP1P56278 107 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 BLOC1S1P78537 153 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 DBPQ10586 325 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-216ENST00000639300 SSX1Q16384 188 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 VN1R4Q7Z5H5 301 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 ARIH2OSQ8N7S6 290 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 RNF170Q96K19 258 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 DERL3Q96Q80 235 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 SLC22A13Q9Y226 551 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 PCDHGA1Q9Y5H4 931 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 BLVRBP30043 206 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-216ENST00000639300 LSM11P83369 360 aaKnown RBP eCLIP13.18□□□□□ -0.3
SCARB2-216ENST00000639300 CD300CQ08708 224 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 ZNF454Q8N9F8 522 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 APH1BQ8WW43 257 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 RAB3CQ96E17 227 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 RRNAD1Q96FB5 475 aaKnown RBP13.18□□□□□ -0.3
SCARB2-216ENST00000639300 DDOQ99489 341 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 DOK1Q99704 481 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 RGCCQ9H4X1 137 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 NIPAL2Q9H841 368 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 NPAP1Q9NZP6 1156 aa13.18□□□□□ -0.3
SCARB2-216ENST00000639300 EIF4EP06730 217 aaKnown RBP13.17□□□□□ -0.3
SCARB2-216ENST00000639300 LIMS3P0CW19 117 aa13.17□□□□□ -0.3
SCARB2-216ENST00000639300 LIMS4P0CW20 117 aa13.17□□□□□ -0.3
SCARB2-216ENST00000639300 FCGR2AP12318 317 aa13.17□□□□□ -0.3
SCARB2-216ENST00000639300 NFYAP23511 347 aaPredicted RBP13.17□□□□□ -0.3
SCARB2-216ENST00000639300 SDHAP31040 664 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms