RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 PXDC1Q5TGL8 231 aa15.25■□□□□ 0.03
SCARB2-210ENST00000638567 KIRREL2Q6UWL6 708 aa15.25■□□□□ 0.03
SCARB2-210ENST00000638567 RNF170Q96K19 258 aa15.25■□□□□ 0.03
SCARB2-210ENST00000638567 ZNF578Q96N58 590 aaPredicted RBP15.25■□□□□ 0.03
SCARB2-210ENST00000638567 ZNF649Q9BS31 505 aa15.25■□□□□ 0.03
SCARB2-210ENST00000638567 KLK11Q9UBX7 282 aa15.25■□□□□ 0.03
SCARB2-210ENST00000638567 TBX19O60806 448 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 GIPP09681 153 aaPredicted RBP15.24■□□□□ 0.03
SCARB2-210ENST00000638567 HSD17B7P56937 341 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 DYRK1AQ13627 763 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 EXOSC2Q13868 293 aaKnown RBP15.24■□□□□ 0.03
SCARB2-210ENST00000638567 OR8D4Q8NGM9 314 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 OR14A16Q8NHC5 309 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 BAHD1Q8TBE0 780 aaPredicted RBP15.24■□□□□ 0.03
SCARB2-210ENST00000638567 RAB3CQ96E17 227 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 SIRT3Q9NTG7 399 aaPredicted RBP15.24■□□□□ 0.03
SCARB2-210ENST00000638567 LY75O60449 1722 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 C2orf72A6NCS6 295 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 CCSO14618 274 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 P04436 131 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 HOXB3P14651 431 aaPredicted RBP15.24■□□□□ 0.03
SCARB2-210ENST00000638567 SDHBP21912 280 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 DCTDP32321 178 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 TMUB2Q71RG4 321 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 LDAHQ9H6V9 325 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 RPS10P5Q9NQ39 176 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 C20orf141Q9NUB4 165 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 OR2W5A6NFC9 320 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 PMS2P2O95744 297 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 INHBBP09529 407 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 IFNGR1P15260 489 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 BIDP55957 195 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 TMEM176BQ3YBM2 270 aaPredicted RBP15.24■□□□□ 0.03
SCARB2-210ENST00000638567 MICU1Q9BPX6 476 aa15.24■□□□□ 0.03
SCARB2-210ENST00000638567 ING1Q9UK53 422 aaPredicted RBP15.24■□□□□ 0.03
SCARB2-210ENST00000638567 COA3Q9Y2R0 106 aaPredicted RBP15.24■□□□□ 0.03
SCARB2-210ENST00000638567 hCG_1807616A0A1W2PRN6 198 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 SYNGR4O95473 234 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 M6PRP20645 277 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 SLC36A2Q495M3 483 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 FCRL6Q6DN72 434 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 ZNF529Q6P280 563 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 DCXRQ7Z4W1 244 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 ADGRE4PQ86SQ3 457 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 C16orf52Q8NHV5 167 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 SEMA4CQ9C0C4 833 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 CHRDQ9H2X0 955 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 REV1Q9UBZ9 1251 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 A0A087WV62 115 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 A8MVM7 634 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 GPR171O14626 319 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 SCO1O75880 301 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 CD1CP29017 333 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 EMDP50402 254 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 CDKN3Q16667 212 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 SVBPQ8N300 66 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 BCORP1Q8N888 145 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 SCARB1Q8WTV0 552 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 ZNF775Q96BV0 537 aaPredicted RBP15.23■□□□□ 0.03
SCARB2-210ENST00000638567 RADILQ96JH8 1075 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 SDHAF2Q9NX18 166 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 OR52A1Q9UKL2 312 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 RP1P56715 2156 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 SLC22A23A1A5C7 686 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 GGT3PA6NGU5 568 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 JMJD7P0C870 316 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 SDHAP31040 664 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 THBS2P35442 1172 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 AKR1C2P52895 323 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 C1orf140Q5VVS0 124 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 NKAIN2Q5VXU1 208 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 PXT1Q8NFP0 134 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 DCBLD2Q96PD2 775 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 SLCO5A1Q9H2Y9 848 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 PLEKHB1Q9UF11 243 aaPredicted RBP15.23■□□□□ 0.03
SCARB2-210ENST00000638567 ATF1P18846 271 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 OR4D11Q8NGI4 311 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 SMIM4Q8WVI0 70 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 FGF21Q9NSA1 209 aa15.23■□□□□ 0.03
SCARB2-210ENST00000638567 CABIN1Q9Y6J0 2220 aa15.22■□□□□ 0.03
SCARB2-210ENST00000638567 TAF1LQ8IZX4 1826 aa15.22■□□□□ 0.03
SCARB2-210ENST00000638567 BRINP1O60477 761 aa15.22■□□□□ 0.03
SCARB2-210ENST00000638567 SLC2A1P11166 492 aa15.22■□□□□ 0.03
SCARB2-210ENST00000638567 CSNK1EP49674 416 aaKnown RBP15.22■□□□□ 0.03
SCARB2-210ENST00000638567 RPL18Q07020 188 aaKnown RBP15.22■□□□□ 0.03
SCARB2-210ENST00000638567 CA13Q8N1Q1 262 aa15.22■□□□□ 0.03
SCARB2-210ENST00000638567 S100PBPQ96BU1 408 aa15.22■□□□□ 0.03
SCARB2-210ENST00000638567 KCNJ16Q9NPI9 418 aa15.22■□□□□ 0.03
SCARB2-210ENST00000638567 ZFP57Q9NU63 452 aa15.22■□□□□ 0.03
SCARB2-210ENST00000638567 SERGEFQ9UGK8 458 aa15.22■□□□□ 0.03
SCARB2-210ENST00000638567 SIGLEC7Q9Y286 467 aa15.22■□□□□ 0.03
SCARB2-210ENST00000638567 MRPS28Q9Y2Q9 187 aaKnown RBP15.22■□□□□ 0.03
SCARB2-210ENST00000638567 SPAG17Q6Q759 2223 aa15.22■□□□□ 0.03
SCARB2-210ENST00000638567 ATG2BQ96BY7 2078 aa15.22■□□□□ 0.03
SCARB2-210ENST00000638567 COL11A1P12107 1806 aaPredicted RBP15.22■□□□□ 0.03
SCARB2-210ENST00000638567 ZFAND5O76080 213 aa15.22■□□□□ 0.03
SCARB2-210ENST00000638567 RAB6AP20340 208 aa15.22■□□□□ 0.03
SCARB2-210ENST00000638567 OTX2P32243 289 aa15.22■□□□□ 0.03
SCARB2-210ENST00000638567 LSM11P83369 360 aaKnown RBP eCLIP15.22■□□□□ 0.03
SCARB2-210ENST00000638567 DBPQ10586 325 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms