RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 DDAH2O95865 285 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 IL32P24001 234 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 SRP9P49458 86 aaKnown RBP13.14□□□□□ -0.31
SCARB2-208ENST00000638372 HNRNPFP52597 415 aaKnown RBP13.14□□□□□ -0.31
SCARB2-208ENST00000638372 GABREP78334 506 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 CNN3Q15417 329 aaKnown RBP13.14□□□□□ -0.31
SCARB2-208ENST00000638372 YOD1Q5VVQ6 348 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-208ENST00000638372 CORO6Q6QEF8 472 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 SULF2Q8IWU5 870 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 ADGRF3Q8IZF5 1079 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 CADM3Q8N126 398 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 UCN3Q969E3 161 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 FAM3DQ96BQ1 224 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 NICN1Q9BSH3 213 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 CALHM2Q9HA72 323 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 SCN3AQ9NY46 2000 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 SERPINE2P07093 398 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 EMDP50402 254 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 RPL18Q07020 188 aaKnown RBP13.14□□□□□ -0.31
SCARB2-208ENST00000638372 PRSS36Q5K4E3 855 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 CMTM1Q8IZ96 169 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 SLAMF7Q9NQ25 335 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 EMC3Q9P0I2 261 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 TRABD2BA6NFA1 517 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 MT-ATP6P00846 226 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 ATP1B1P05026 303 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 CLDN6P56747 220 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 CARD18P57730 90 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 FABP5Q01469 135 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 FCN2Q15485 313 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 COMMD7Q86VX2 200 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 OR2A14Q96R47 310 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 OR52A1Q9UKL2 312 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 TMEM82A0PJX8 343 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 HYAL3O43820 417 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-208ENST00000638372 PRICKLE3O43900 615 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-208ENST00000638372 CD46P15529 392 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 BLVRBP30043 206 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-208ENST00000638372 EIF1P41567 113 aaKnown RBP13.13□□□□□ -0.31
SCARB2-208ENST00000638372 ATP1B3P54709 279 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 PCBD1P61457 104 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 SLC35D3Q5M8T2 416 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 ZNF695Q8IW36 515 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 SLA2Q9H6Q3 261 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 ZNF346Q9UL40 294 aaKnown RBP13.13□□□□□ -0.31
SCARB2-208ENST00000638372 A4GNTQ9UNA3 340 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 FITM1A5D6W6 292 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 LMO7DNF2Z398 122 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 FABP7O15540 132 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 P2RX6O15547 441 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 RBMS2Q15434 407 aaKnown RBP13.13□□□□□ -0.31
SCARB2-208ENST00000638372 HACD4Q5VWC8 232 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 TMEM92Q6UXU6 159 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 GOT1L1Q8NHS2 421 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-208ENST00000638372 FNDC9Q8TBE3 224 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 RAB3CQ96E17 227 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 CMSS1Q9BQ75 279 aaKnown RBP13.13□□□□□ -0.31
SCARB2-208ENST00000638372 NDUFB11Q9NX14 153 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 MRPS28Q9Y2Q9 187 aaKnown RBP13.13□□□□□ -0.31
SCARB2-208ENST00000638372 GPR55Q9Y2T6 319 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-208ENST00000638372 POM121CA8CG34 1229 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 METTL12A8MUP2 240 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 H3BUI4 141 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 PAPLNO95428 1278 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 BPNT1O95861 308 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 ELK1P19419 428 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 COL9A1P20849 921 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 GCH1P30793 250 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 RRAS2P62070 204 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-208ENST00000638372 FAM27D1Q5T7N8 215 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 ZNF546Q86UE3 836 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 GLYATL2Q8WU03 294 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 ORAI1Q96D31 301 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 MED29Q9NX70 200 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 XIRP1Q702N8 1843 aaKnown RBP13.13□□□□□ -0.31
SCARB2-208ENST00000638372 ZNF318Q5VUA4 2279 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 NCOR1O75376 2440 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 H0YIG0 161 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 ZNF93P35789 620 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-208ENST00000638372 ZNF585AQ6P3V2 769 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 Q6ZTK2 550 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 CCDC71LQ8N9Z2 235 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 GPR32P1Q8NGA4 272 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 ASF1BQ9NVP2 202 aa13.13□□□□□ -0.31
SCARB2-208ENST00000638372 NOSIPQ9Y314 301 aaKnown RBP13.13□□□□□ -0.31
SCARB2-208ENST00000638372 CCDC163A0A0D9SF12 145 aa13.12□□□□□ -0.31
SCARB2-208ENST00000638372 M0QYG6 137 aa13.12□□□□□ -0.31
SCARB2-208ENST00000638372 CAMLGP49069 296 aa13.12□□□□□ -0.31
SCARB2-208ENST00000638372 DIO1P49895 249 aa13.12□□□□□ -0.31
SCARB2-208ENST00000638372 TAS2R31P59538 309 aa13.12□□□□□ -0.31
SCARB2-208ENST00000638372 SORDQ00796 357 aa13.12□□□□□ -0.31
SCARB2-208ENST00000638372 GPR157Q5UAW9 335 aa13.12□□□□□ -0.31
SCARB2-208ENST00000638372 ZNF813Q6ZN06 617 aa13.12□□□□□ -0.31
SCARB2-208ENST00000638372 KIF18BQ86Y91 864 aa13.12□□□□□ -0.31
SCARB2-208ENST00000638372 OR4C3Q8NH37 302 aa13.12□□□□□ -0.31
SCARB2-208ENST00000638372 PSD2Q9BQI7 771 aa13.12□□□□□ -0.31
SCARB2-208ENST00000638372 SMIM3Q9BZL3 60 aa13.12□□□□□ -0.31
SCARB2-208ENST00000638372 DNAJB11Q9UBS4 358 aa13.12□□□□□ -0.31
SCARB2-208ENST00000638372 FBXL2Q9UKC9 423 aa13.12□□□□□ -0.31
SCARB2-208ENST00000638372 OTOL1A6NHN0 477 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms