RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 TPT1P13693 172 aaKnown RBP5.65□□□□□ -1.5
SCN1A-217ENST00000637988 MAKP20794 623 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 TAS2R45P59539 299 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 KCNJ10P78508 379 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 SPOCK1Q08629 439 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 RGNQ15493 299 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 OR1C1Q15619 314 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 C4orf17Q53FE4 359 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 KRBOX4Q5JUW0 171 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 OGFOD3Q6PK18 319 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 BHLHE23Q8NDY6 225 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 OR13C8Q8NGS7 320 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 KCNG3Q8TAE7 436 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 NETO1Q8TDF5 533 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 GMLQ99445 158 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 AAMDCQ9H7C9 122 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 WDR76Q9H967 626 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 LAMP3Q9UQV4 416 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 KIF13BQ9NQT8 1826 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 TRAV27A0A087WT01 109 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 PCP4L1A6NKN8 68 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 C9orf172C9J069 976 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 FAM72CH0Y354 149 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 HOXC11O43248 304 aaPredicted RBP5.65□□□□□ -1.5
SCN1A-217ENST00000637988 RETP07949 1114 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 AQP2P41181 271 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 SELENOWP63302 87 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 DUSP2Q05923 314 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 SELENBP1Q13228 472 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 SMAD2Q15796 467 aaKnown RBP5.65□□□□□ -1.5
SCN1A-217ENST00000637988 ZNF181Q2M3W8 571 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 FAM72AQ5TYM5 149 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 METTL11BQ5VVY1 283 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 FAM72DQ6L9T8 149 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 FCRLAQ7L513 359 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 ERMP1Q7Z2K6 904 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 FAM72BQ86X60 149 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 GIMAP1Q8WWP7 306 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 INSM2Q96T92 566 aaPredicted RBP5.65□□□□□ -1.5
SCN1A-217ENST00000637988 RSRP1Q9BUV0 290 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 CRISPLD2Q9H0B8 497 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 CHST8Q9H2A9 424 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 ERVMER34-1Q9H9K5 563 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 ZNF281Q9Y2X9 895 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 TIMM9Q9Y5J7 89 aa5.65□□□□□ -1.5
SCN1A-217ENST00000637988 EFSO43281 561 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 EIF4E2O60573 245 aaKnown RBP5.65□□□□□ -1.51
SCN1A-217ENST00000637988 TBXA2RP21731 343 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 LGALS7P47929 136 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 UQCRFS1P47985 274 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 RAB5BP61020 215 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 ZFP82Q8N141 532 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 FBXL6Q8N531 539 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 NKAIN3Q8N8D7 197 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 C6orf106Q9H6K1 298 aaPredicted RBP5.65□□□□□ -1.51
SCN1A-217ENST00000637988 A3GALT2U3KPV4 340 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 SNED1Q8TER0 1413 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 KIR2DS1A0A191URI9 304 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 GAPDHSO14556 408 aaPredicted RBP5.65□□□□□ -1.51
SCN1A-217ENST00000637988 PENKP01210 267 aaPredicted RBP5.65□□□□□ -1.51
SCN1A-217ENST00000637988 IGHV3-9P01782 118 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 HMGN2P05204 90 aaKnown RBP5.65□□□□□ -1.51
SCN1A-217ENST00000637988 C7P10643 843 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 SLC19A1P41440 591 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 KIR2DS4P43632 304 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 SIGLEC14Q08ET2 396 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 SMAGPQ0VAQ4 97 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 KIR2DS1Q14954 304 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 PEA15Q15121 130 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 OR4D1Q15615 310 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 COQ5Q5HYK3 327 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 HES3Q5TGS1 186 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 WDR88Q6ZMY6 472 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 KLHDC9Q8NEP7 349 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 OR56B4Q8NH76 319 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 L3HYPDHQ96EM0 354 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 APIPQ96GX9 242 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 FYTTD1Q96QD9 318 aaKnown RBP5.65□□□□□ -1.51
SCN1A-217ENST00000637988 SLC6A17Q9H1V8 727 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 V9GY05 133 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 SCN4AP35499 1836 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 SSC5DA1L4H1 1573 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 SLC16A6O15403 523 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 HLA-HP01893 362 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 HBE1P02100 147 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 CTRB1P17538 263 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 RPL7P18124 248 aaKnown RBP5.65□□□□□ -1.51
SCN1A-217ENST00000637988 OPRD1P41143 372 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 CLDN6P56747 220 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 KCNAB1Q14722 419 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 YIF1BQ5BJH7 314 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 CST9Q5W186 159 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 CTRB2Q6GPI1 263 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 OR52H1Q8NGJ2 320 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 OR1E3Q8WZA6 343 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 C4orf36Q96KX1 117 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 ARL6Q9H0F7 186 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 LUZP4Q9P127 313 aa5.65□□□□□ -1.51
SCN1A-217ENST00000637988 ANKRD31Q8N7Z5 1873 aa5.64□□□□□ -1.51
SCN1A-217ENST00000637988 M0R3H8 397 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms