RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 PLAUP00749 431 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 CBR1P16152 277 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 SRMP19623 302 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 CCR7P32248 378 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 PPOXP50336 477 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 SLC18A1P54219 525 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 SUSD1Q6UWL2 747 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 CDRT4Q8N9R6 151 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 DCAF4L2Q8NA75 395 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 ANKLE1Q8NAG6 615 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 AGBL5Q8NDL9 886 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 OR4K13Q8NH42 304 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 EDARADDQ8WWZ3 215 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 TMEM18Q96B42 140 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 CDCP1Q9H5V8 836 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 EDA2RQ9HAV5 297 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 THADAQ6YHU6 1953 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 EDN3P14138 238 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 NTSR1P30989 418 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 PCGF2P35227 344 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 RPL30P62888 115 aaKnown RBP5.59□□□□□ -1.51
SCN1A-212ENST00000636194 ZNF90Q03938 601 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 C19orf57Q0VDD7 668 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 CIRBPQ14011 172 aaKnown RBP5.59□□□□□ -1.51
SCN1A-212ENST00000636194 CD226Q15762 336 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 NNATQ16517 81 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 RPL22L1Q6P5R6 122 aaKnown RBP5.59□□□□□ -1.51
SCN1A-212ENST00000636194 SIRT2Q8IXJ6 389 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 ENTHD1Q8IYW4 607 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 OR1N2Q8NGR9 330 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 ZC3HAV1LQ96H79 300 aaKnown RBP5.59□□□□□ -1.51
SCN1A-212ENST00000636194 ACTR3CQ9C0K3 210 aaPredicted RBP5.59□□□□□ -1.51
SCN1A-212ENST00000636194 CLEC5AQ9NY25 188 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 AMMECR1Q9Y4X0 333 aaPredicted RBP5.59□□□□□ -1.51
SCN1A-212ENST00000636194 NCOA3Q9Y6Q9 1424 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 TRBV11-1A0A0K0K1C0 115 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 FAM181BA6NEQ2 426 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 OR2T8A6NH00 312 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 MRPS14O60783 128 aaKnown RBP5.59□□□□□ -1.51
SCN1A-212ENST00000636194 KLF7O75840 302 aaPredicted RBP5.59□□□□□ -1.51
SCN1A-212ENST00000636194 ELNP15502 786 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 CDKN2BP42772 138 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 WNT4P56705 351 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 SPCS3P61009 180 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 SMIM21Q3B7S5 101 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 FBXO48Q5FWF7 155 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 ANKRD16Q6P6B7 361 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 OR51L1Q8NGJ5 315 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 OR1L3Q8NH93 324 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 SLC7A6Q92536 515 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 TVP23CQ96ET8 276 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 EBF3Q9H4W6 596 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 FZD1Q9UP38 647 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 NFS1Q9Y697 457 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 CEP170Q5SW79 1584 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 SPATA31A1Q5TZJ5 1347 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 XRN1Q8IZH2 1706 aaKnown RBP5.59□□□□□ -1.51
SCN1A-212ENST00000636194 KIR2DS5A0A0G2JLQ3 304 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 A0A0G2JNG1 304 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 PRAMEF25A6NGN4 478 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 KIR2DS3K7RE56 304 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 TNFRSF10AO00220 468 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 GABRPO00591 440 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 CYR61O00622 381 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 RASAL1O95294 804 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 GBAP04062 536 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 CNN1P51911 297 aaKnown RBP5.59□□□□□ -1.51
SCN1A-212ENST00000636194 TPPP2P59282 170 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 KRTDAPP60985 99 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 KEAP1Q14145 624 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 KIR2DS5Q14953 304 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 EXT1Q16394 746 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 WDR88Q6ZMY6 472 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 OR52N2Q8NGI0 321 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 SMOC2Q9H3U7 446 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 GKN1Q9NS71 199 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 OR52A1Q9UKL2 312 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 PIGLQ9Y2B2 252 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 PLXNB1O43157 2135 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 A0A1B0GTQ1 180 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 A0A1W2PQL4 384 aaPredicted RBP5.59□□□□□ -1.51
SCN1A-212ENST00000636194 GPRIN2O60269 458 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 CLDN7O95471 211 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 STATHP02808 62 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 ACSM4P0C7M7 580 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 APEHP13798 732 aaKnown RBP5.59□□□□□ -1.51
SCN1A-212ENST00000636194 TBPL1P62380 186 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 YBX1P67809 324 aaKnown RBP5.59□□□□□ -1.51
SCN1A-212ENST00000636194 OTUD1Q5VV17 481 aaPredicted RBP5.59□□□□□ -1.51
SCN1A-212ENST00000636194 PLBD1Q6P4A8 553 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 OR51A4Q8NGJ6 313 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 ADAMTS16Q8TE57 1224 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 NKD2Q969F2 451 aaPredicted RBP5.59□□□□□ -1.51
SCN1A-212ENST00000636194 FOXC2Q99958 501 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 RTL8AQ9BWD3 113 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 ZDHHC2Q9UIJ5 367 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 ETV7Q9Y603 341 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 ADGRB1O14514 1584 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 SETBP1Q9Y6X0 1596 aa5.59□□□□□ -1.52
SCN1A-212ENST00000636194 IDSB3KWA1 339 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms