RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 A0A0G2JMP0 313 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 A0A0X1KG70 313 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 KPNA4O00629 521 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-206ENST00000634451 PRSS23O95084 383 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 OPN1SWP03999 348 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 ADORA3P0DMS8 318 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 OR8G3PP0DMU2 310 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 ETS2P15036 469 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 ZNF250P15622 560 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 KLF3P57682 345 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-206ENST00000634451 CDK6Q00534 326 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 PAGE3Q5JUK9 113 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 PRR31Q5SQ13 230 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 CEP85LQ5SZL2 805 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 DCAF12L2Q5VW00 463 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 SLC35D2Q76EJ3 337 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 PXKQ7Z7A4 578 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 FUNDC1Q8IVP5 155 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 ZNF101Q8IZC7 436 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 BPIFB2Q8N4F0 458 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 SCAIQ8N9R8 606 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 CPEB3Q8NE35 698 aaKnown RBP10.93□□□□□ -0.66
LINC00339-206ENST00000634451 OR4M2Q8NGB6 313 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 SYNPRQ8TBG9 265 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 DVL3Q92997 716 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-206ENST00000634451 SLC35B4Q969S0 331 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 SLC47A1Q96FL8 570 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 ZNF48Q96MX3 618 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-206ENST00000634451 RMND5AQ9H871 391 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 MMP26Q9NRE1 261 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 TAS2R5Q9NYW4 299 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 VAPAQ9P0L0 249 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 ZNF346Q9UL40 294 aaKnown RBP10.93□□□□□ -0.66
LINC00339-206ENST00000634451 TANC2Q9HCD6 1990 aa10.93□□□□□ -0.66
LINC00339-206ENST00000634451 CMYA5Q8N3K9 4069 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 TMEM247A6NEH6 219 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 ZSCAN5BA6NJL1 495 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 TRPC5OSA6NMA1 111 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 UBDO15205 165 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 DHHO43323 396 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 SPRY3O43610 288 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 CH25HO95992 272 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 IGHV1-46P01743 117 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 WNT5AP41221 380 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 CRYBB2P43320 205 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 RAD52P43351 418 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 SEC61A1P61619 476 aaKnown RBP10.92□□□□□ -0.66
LINC00339-206ENST00000634451 HHATQ5VTY9 493 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 FAM91A1Q658Y4 838 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 TMEM154Q6P9G4 183 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 C5orf46Q6UWT4 87 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 JAZF1Q86VZ6 243 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 LRRC18Q8N456 261 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 MREGQ8N565 214 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 GPR32P1Q8NGA4 272 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 OR5J2Q8NH18 312 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 GEMIN6Q8WXD5 167 aaKnown RBP10.92□□□□□ -0.66
LINC00339-206ENST00000634451 ZNF347Q96SE7 839 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 ZNF747Q9BV97 191 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 SUCNR1Q9BXA5 334 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 C7orf69Q9H7B7 122 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 CDH20Q9HBT6 801 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 SLC52A3Q9NQ40 469 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 THAP1Q9NVV9 213 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 UBAP1Q9NZ09 502 aa10.92□□□□□ -0.66
LINC00339-206ENST00000634451 TESQ9UGI8 421 aaKnown RBP10.92□□□□□ -0.66
LINC00339-206ENST00000634451 NOTCH1P46531 2555 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 TRBV5-3A0A0A0MS03 114 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 IGKV1D-43A0A0B4J1Z2 117 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 TMEM120BA0PK00 339 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 DNAJC9-AS1A6NH13 148 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 CPSF4LA6NMK7 179 aaKnown RBP10.91□□□□□ -0.66
LINC00339-206ENST00000634451 TPD52L2O43399 206 aaKnown RBP10.91□□□□□ -0.66
LINC00339-206ENST00000634451 MMP7P09237 267 aaPredicted RBP10.91□□□□□ -0.66
LINC00339-206ENST00000634451 QDPRP09417 244 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 PGA4P0DJD7 388 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 PGA3P0DJD8 388 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 CDAP32320 146 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 NCALDP61601 193 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 DEFA6Q01524 100 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 FADDQ13158 208 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 SCARB2Q14108 478 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 ZNF74Q16587 644 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 KLF17Q5JT82 389 aaPredicted RBP10.91□□□□□ -0.66
LINC00339-206ENST00000634451 REP15Q6BDI9 236 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 REEP3Q6NUK4 255 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 MSANTD1Q6ZTZ1 278 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 PIWIL3Q7Z3Z3 882 aaKnown RBP10.91□□□□□ -0.66
LINC00339-206ENST00000634451 DEFB108BQ8NET1 73 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 OR6T1Q8NGN1 323 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 OR6S1Q8NH40 331 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 OR6X1Q8NH79 312 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 NANPQ8TBE9 248 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 IPCEF1Q8WWN9 437 aaPredicted RBP10.91□□□□□ -0.66
LINC00339-206ENST00000634451 CCL17Q92583 94 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 LRRC58Q96CX6 371 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 EPYCQ99645 322 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 GAL3ST1Q99999 423 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 RNF121Q9H920 327 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 SAP30LQ9HAJ7 183 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms