RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 TRDV1A0A1B0GX56 115 aa11.77□□□□□ -0.52
SCN8A-209ENST00000627620 SRMP19623 302 aa11.77□□□□□ -0.52
SCN8A-209ENST00000627620 MAP2K6P52564 334 aa11.77□□□□□ -0.52
SCN8A-209ENST00000627620 MCCD1P59942 119 aaPredicted RBP11.77□□□□□ -0.52
SCN8A-209ENST00000627620 ZNF92Q03936 586 aa11.77□□□□□ -0.52
SCN8A-209ENST00000627620 GLYR1Q49A26 553 aaPredicted RBP11.77□□□□□ -0.52
SCN8A-209ENST00000627620 DVL3Q92997 716 aaPredicted RBP11.77□□□□□ -0.52
SCN8A-209ENST00000627620 GPR78Q96P69 363 aa11.77□□□□□ -0.52
SCN8A-209ENST00000627620 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.77□□□□□ -0.52
SCN8A-209ENST00000627620 C19orf53Q9UNZ5 99 aaPredicted RBP11.77□□□□□ -0.52
SCN8A-209ENST00000627620 LOC100289279A0A1B0GTE1 492 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 A0A1W2PR48 441 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 HMX2A2RU54 273 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 WNT11O96014 354 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 IGFBP6P24592 240 aaPredicted RBP11.77□□□□□ -0.53
SCN8A-209ENST00000627620 RPL27P61353 136 aaKnown RBP11.77□□□□□ -0.53
SCN8A-209ENST00000627620 SNRPGP62308 76 aaKnown RBP11.77□□□□□ -0.53
SCN8A-209ENST00000627620 SSX2Q16385 188 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 TMEM71Q6P5X7 295 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 SLC22A25Q6T423 547 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 ADGRE4PQ86SQ3 457 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 SIAH3Q8IW03 269 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 NKAIN3Q8N8D7 197 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 ABHD6Q9BV23 337 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 GON7Q9BXV9 100 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 RGPD1P0DJD0 1748 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 FAM166BA8MTA8 275 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 C17orf112F2Z3M2 114 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 M0QYG6 137 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 LGI1O95970 557 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 PMP2P02689 132 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 EDDM3BP56851 147 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 TBC1D28Q2M2D7 210 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 SYT13Q7L8C5 426 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 FAM71CQ8NEG0 241 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 OR6M1Q8NGM8 313 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 SLC25A43Q8WUT9 341 aaPredicted RBP11.77□□□□□ -0.53
SCN8A-209ENST00000627620 PATE1Q8WXA2 126 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 APH1AQ96BI3 265 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 PHF7Q9BWX1 381 aaPredicted RBP11.77□□□□□ -0.53
SCN8A-209ENST00000627620 ZMAT3Q9HA38 289 aaKnown RBP11.77□□□□□ -0.53
SCN8A-209ENST00000627620 GFOD1Q9NXC2 390 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 B3GAT1Q9P2W7 334 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 RAB22AQ9UL26 194 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 RRP8O43159 456 aaKnown RBP11.77□□□□□ -0.53
SCN8A-209ENST00000627620 APOBEC1P41238 236 aaKnown RBP11.77□□□□□ -0.53
SCN8A-209ENST00000627620 GLIPR1L1Q6UWM5 242 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 ALKAL2Q6UX46 152 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 C6orf15Q6UXA7 325 aaPredicted RBP11.77□□□□□ -0.53
SCN8A-209ENST00000627620 C1QTNF3Q9BXJ4 246 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 RPH3ALQ9UNE2 315 aa11.77□□□□□ -0.53
SCN8A-209ENST00000627620 PPP3CBP16298 524 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 ATPAF1Q5TC12 328 aaPredicted RBP11.76□□□□□ -0.53
SCN8A-209ENST00000627620 STEAP3Q658P3 488 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 H1FXQ92522 213 aaKnown RBP11.76□□□□□ -0.53
SCN8A-209ENST00000627620 PHYHIPQ92561 330 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 SLC35A4Q96G79 324 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 CSF3RQ99062 836 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 ZNF355PQ9NSJ1 428 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 GPATCH2Q9NW75 528 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 HMGN4O00479 90 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 IGHV3-9P01782 118 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 CASP3P42574 277 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 SRPXP78539 464 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 MRPS34P82930 218 aaKnown RBP11.76□□□□□ -0.53
SCN8A-209ENST00000627620 ACVR1Q04771 509 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 AKR1C1Q04828 323 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 ARHGAP11BQ3KRB8 267 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 UBE2FQ969M7 185 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 LYSMD1Q96S90 227 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 CLDN1O95832 211 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 GSTP1P09211 210 aaKnown RBP11.76□□□□□ -0.53
SCN8A-209ENST00000627620 SLC2A1P11166 492 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 LIPAP38571 399 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 OGFOD3Q6PK18 319 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 IFI44Q8TCB0 444 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 SDF2Q99470 211 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 PDFQ9HBH1 243 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 NRG2O14511 850 aaPredicted RBP11.76□□□□□ -0.53
SCN8A-209ENST00000627620 NSA2O95478 260 aaKnown RBP11.76□□□□□ -0.53
SCN8A-209ENST00000627620 TCRBP04435 133 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 S100A7P31151 101 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 EBPQ15125 230 aaKnown RBP11.76□□□□□ -0.53
SCN8A-209ENST00000627620 NAXDQ8IW45 347 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 MAML2Q8IZL2 1156 aaPredicted RBP11.76□□□□□ -0.53
SCN8A-209ENST00000627620 SIRT6Q8N6T7 355 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 ZNF225Q9UK10 706 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 PHF1O43189 567 aaPredicted RBP11.76□□□□□ -0.53
SCN8A-209ENST00000627620 NID1P14543 1247 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 BCKDHBP21953 392 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 PMPCAQ10713 525 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 PTTG3PQ9NZH4 202 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 NTNG1Q9Y2I2 539 aa11.76□□□□□ -0.53
SCN8A-209ENST00000627620 M0R082 166 aa11.75□□□□□ -0.53
SCN8A-209ENST00000627620 HBG1P69891 147 aa11.75□□□□□ -0.53
SCN8A-209ENST00000627620 HBG2P69892 147 aa11.75□□□□□ -0.53
SCN8A-209ENST00000627620 TEKQ02763 1124 aa11.75□□□□□ -0.53
SCN8A-209ENST00000627620 BAXQ07812 192 aa11.75□□□□□ -0.53
SCN8A-209ENST00000627620 SYT6Q5T7P8 510 aaPredicted RBP11.75□□□□□ -0.53
SCN8A-209ENST00000627620 YOD1Q5VVQ6 348 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms