RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 VSTM5A8MXK1 200 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 M0R1B8 84 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 TNFRSF11BO00300 401 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 ABCD4O14678 606 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 GSC2O15499 205 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 TRMUO75648 421 aaKnown RBP12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 ATE1O95260 518 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 PTHP01270 115 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 IGKV3-15P01624 115 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 QDPRP09417 244 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 BMP4P12644 408 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 CBR1P16152 277 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 SLC6A6P31641 620 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 LGALS3BPQ08380 585 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 GSG1Q2KHT4 349 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 SLC36A2Q495M3 483 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 ZNF672Q499Z4 452 aaPredicted RBP12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 C10orf128Q5T292 105 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 C1orf94Q6P1W5 598 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 SMARCD3Q6STE5 483 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 SLC22A25Q6T423 547 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 LRRC75AQ8NAA5 344 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 TMEM171Q8WVE6 324 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 AKAP1Q92667 903 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 MCHR2Q969V1 340 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 GTPBP3Q969Y2 492 aaKnown RBP12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 CLPTM1LQ96KA5 538 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 TNFRSF13CQ96RJ3 184 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 KCNK17Q96T54 332 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 CCL19Q99731 98 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 WACQ9BTA9 647 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 GRIP2Q9C0E4 1043 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 LRMDAQ9H2I8 198 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 TMEM38BQ9NVV0 291 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 NPAP1Q9NZP6 1156 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 POMPQ9Y244 141 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 SAMHD1Q9Y3Z3 626 aaKnown RBP12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 LYVE1Q9Y5Y7 322 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 POLQO75417 2590 aa12.24□□□□□ -0.45
SNRPA1-216ENST00000626000 A0A096LPE4 126 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 A0A1W2PPZ6 126 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 ARRDC5A6NEK1 342 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 EBAG9O00559 213 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 CDC42EP2O14613 210 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 IMPA2O14732 288 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 IDH3BO43837 385 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 CCNB2O95067 398 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 RAB36O95755 333 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 IGLV1-44P01699 117 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 GSTM3P21266 225 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 SDHAP31040 664 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 ACVR1BP36896 505 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 CAPZA2P47755 286 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 ARHGDIAP52565 204 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 MRPS34P82930 218 aaKnown RBP12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 TSPAN31Q12999 210 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 TOP3AQ13472 1001 aaPredicted RBP12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 SEC23BQ15437 767 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 DEFB113Q30KQ7 82 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 ZNF544Q6NX49 715 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 CCDC121Q6ZUS5 278 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 SPATA24Q86W54 205 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 LRRC75A-AS1Q8N1F1 130 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 OR4F15Q8NGB8 312 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 OR52L1Q8NGH7 329 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 ZNF519Q8TB69 540 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 FANK1Q8TC84 345 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 ZNF570Q96NI8 536 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 NRIP3Q9NQ35 241 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 CCM2LQ9NUG4 571 aaPredicted RBP12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 PLEKHA6Q9Y2H5 1048 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 SPEF1Q9Y4P9 236 aa12.23□□□□□ -0.45
SNRPA1-216ENST00000626000 RAI1Q7Z5J4 1906 aaPredicted RBP12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 GNGT2O14610 69 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 ARPC3O15145 178 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 ARHGEF9O43307 516 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 PTP4A3O75365 173 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 CIB2O75838 187 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 CST1P01037 141 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 B4GALT1P15291 398 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 GSSP48637 474 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 IST1P53990 364 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 CDH11P55287 796 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 LSM11P83369 360 aaKnown RBP eCLIP12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 FHL1Q13642 323 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 PHYHD1Q5SRE7 291 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 AGAP6Q5VW22 663 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 TMEM53Q6P2H8 277 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 LRFN4Q6PJG9 635 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 DNM1P34Q6PK57 102 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 ZER1Q7Z7L7 766 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 C10orf67Q8IYJ2 551 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 ADGRG5Q8IZF4 528 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 SLC22A24Q8N4F4 322 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 CLDN22Q8N7P3 220 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 SNX18Q96RF0 628 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 CHID1Q9BWS9 393 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 CADM1Q9BY67 442 aaKnown RBP12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 NELFAQ9H3P2 528 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 SIAEQ9HAT2 523 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms