RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 BCL2L10Q9HD36 194 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 PAK1IP1Q9NWT1 392 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-229ENST00000622668 DLL3Q9NYJ7 618 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 A0A087WUU8 490 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 BTBD17A6NE02 478 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 CD3GP09693 182 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 CD36P16671 472 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 AZGP1P25311 298 aaKnown RBP8.2□□□□□ -1.1
HDAC9-229ENST00000622668 SNTB1Q13884 538 aaKnown RBP8.2□□□□□ -1.1
HDAC9-229ENST00000622668 MAD2L1BPQ15013 274 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-229ENST00000622668 LIPKQ5VXJ0 399 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 ADGRG5Q8IZF4 528 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 AKR7LQ8NHP1 331 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 MCFD2Q8NI22 146 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 LIPHQ8WWY8 451 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 TM4SF19Q96DZ7 209 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 GINS4Q9BRT9 223 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 IKZF5Q9H5V7 419 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 NUFIP1Q9UHK0 495 aaKnown RBP8.2□□□□□ -1.1
HDAC9-229ENST00000622668 DTX4Q9Y2E6 619 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 KCNMB2Q9Y691 235 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 GREB1Q4ZG55 1949 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 A0A087WUJ7 227 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 MED19A0JLT2 244 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-229ENST00000622668 TRAPPC2LH3BP13 241 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 SPRY3O43610 288 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 GASTP01350 101 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 HLA-HP01893 362 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 PRPH2P23942 346 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 LAP3P28838 519 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 CD226Q15762 336 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 GSG1Q2KHT4 349 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 ABCA11PQ4W5N1 156 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 TMEM244Q5VVB8 128 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 DLEU7Q6UYE1 221 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 DCXRQ7Z4W1 244 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 STK35Q8TDR2 534 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 ZNF721Q8TF20 911 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 KTI12Q96EK9 354 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-229ENST00000622668 TGIF2Q9GZN2 237 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 DAPK2Q9UIK4 370 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 ZNF346Q9UL40 294 aaKnown RBP8.2□□□□□ -1.1
HDAC9-229ENST00000622668 HHLA2Q9UM44 414 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 TSC22D4Q9Y3Q8 395 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 WDR87Q6ZQQ6 2873 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 PPIHO43447 177 aaKnown RBP8.19□□□□□ -1.1
HDAC9-229ENST00000622668 NXPH2O95156 264 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 SLC2A5P22732 501 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 FAUP35544 74 aaKnown RBP8.19□□□□□ -1.1
HDAC9-229ENST00000622668 RPS27P42677 84 aaKnown RBP8.19□□□□□ -1.1
HDAC9-229ENST00000622668 KIR2DL3P43628 341 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 MAP2K3P46734 347 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 TOMM34Q15785 309 aaPredicted RBP8.19□□□□□ -1.1
HDAC9-229ENST00000622668 ZNF684Q5T5D7 378 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 PAQR6Q6TCH4 344 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 FAM131AQ6UXB0 335 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 LRRN1Q6UXK5 716 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 ARIH2OSQ8N7S6 290 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 ZNF610Q8N9Z0 462 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 SLC7A6OSQ96CW6 309 aaPredicted RBP8.19□□□□□ -1.1
HDAC9-229ENST00000622668 ALG8Q9BVK2 526 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 GPATCH2Q9NW75 528 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 CMAHPQ9Y471 501 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 ZGRF1Q86YA3 2104 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 FAM25EA8MYX2 175 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 SNTB2Q13425 540 aaKnown RBP8.19□□□□□ -1.1
HDAC9-229ENST00000622668 RBM39Q14498 530 aaKnown RBP8.19□□□□□ -1.1
HDAC9-229ENST00000622668 SEC23BQ15437 767 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 AWAT2Q6E213 333 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 LCN10Q6JVE6 187 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 CGB2Q6NT52 195 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 SIMC1Q8NDZ2 872 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 FCGR1BQ92637 280 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 HAS2Q92819 552 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 RDH12Q96NR8 316 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 FAM118AQ9NWS6 357 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 FZR1Q9UM11 496 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 ZNHIT1O43257 154 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 RBM34P42696 430 aaKnown RBP8.19□□□□□ -1.1
HDAC9-229ENST00000622668 ATP1B3P54709 279 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 OR8G1Q15617 311 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 SLC22A6Q4U2R8 563 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 KHDC1LQ5JSQ8 128 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 LRRC17Q8N6Y2 441 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 MFSD8Q8NHS3 518 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 HTRA1Q92743 480 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 SLC25A44Q96H78 314 aaPredicted RBP8.19□□□□□ -1.1
HDAC9-229ENST00000622668 TSSK2Q96PF2 358 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 NDUFAF4Q9P032 175 aa8.19□□□□□ -1.1
HDAC9-229ENST00000622668 LOC100509620A0A075B734 347 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 hCG_1809904A0A1W2PP81 198 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 A0A1W2PPE2 198 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 A0A1W2PR64 198 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 A0A1W2PRV1 198 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 NTN1O95631 604 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 MPIG6BO95866 241 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 CT45A8P0DMV1 189 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 CT45A9P0DMV2 189 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 ERGP11308 486 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms