RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 KLK2P20151 261 aa19.18■□□□□ 0.66
SPAST-204ENST00000621856 ENTPD1P49961 510 aa19.18■□□□□ 0.66
SPAST-204ENST00000621856 ETFDHQ16134 617 aa19.18■□□□□ 0.66
SPAST-204ENST00000621856 ZNF404Q494X3 552 aa19.18■□□□□ 0.66
SPAST-204ENST00000621856 HDDC2Q7Z4H3 204 aa19.18■□□□□ 0.66
SPAST-204ENST00000621856 WDFY1Q8IWB7 410 aa19.18■□□□□ 0.66
SPAST-204ENST00000621856 SULF2Q8IWU5 870 aa19.18■□□□□ 0.66
SPAST-204ENST00000621856 PELI1Q96FA3 418 aa19.18■□□□□ 0.66
SPAST-204ENST00000621856 KLHDC2Q9Y2U9 406 aa19.18■□□□□ 0.66
SPAST-204ENST00000621856 TMEM14AQ9Y6G1 99 aa19.18■□□□□ 0.66
SPAST-204ENST00000621856 OR5H15A6NDH6 313 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 PSMD9O00233 223 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 GABRPO00591 440 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 TRAF3IP2O43734 574 aaPredicted RBP19.17■□□□□ 0.66
SPAST-204ENST00000621856 RAMP1O60894 148 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 RGS9O75916 674 aaPredicted RBP19.17■□□□□ 0.66
SPAST-204ENST00000621856 FMODQ06828 376 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 RTP5Q14D33 572 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 TBC1D25Q3MII6 688 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 PLEKHG7Q6ZR37 379 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 DPY19L4Q7Z388 723 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 FAM220AQ7Z4H9 259 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 CCDC86Q9H6F5 360 aaKnown RBP19.17■□□□□ 0.66
SPAST-204ENST00000621856 ACOXLQ9NUZ1 547 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 GALNT8Q9NY28 637 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 COA3Q9Y2R0 106 aaPredicted RBP19.17■□□□□ 0.66
SPAST-204ENST00000621856 CD8B2A6NJW9 211 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 PLPP2O43688 288 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 KHDRBS3O75525 346 aaKnown RBP19.17■□□□□ 0.66
SPAST-204ENST00000621856 CDRT1O95170 752 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 CD8BP10966 210 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 CD53P19397 219 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 FGF9P31371 208 aaPredicted RBP19.17■□□□□ 0.66
SPAST-204ENST00000621856 RPS19P39019 145 aaKnown RBP19.17■□□□□ 0.66
SPAST-204ENST00000621856 RFC3P40938 356 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 OPRL1P41146 370 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 CLRN1P58418 232 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 GLO1Q04760 184 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 CAMK2BQ13554 666 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 NHLRC1Q6VVB1 395 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 THEM6Q8WUY1 208 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 MMP27Q9H306 513 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 SNTG1Q9NSN8 517 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 ST6GALNAC2Q9UJ37 374 aa19.17■□□□□ 0.66
SPAST-204ENST00000621856 KLF13Q9Y2Y9 288 aaPredicted RBP19.17■□□□□ 0.66
SPAST-204ENST00000621856 IGHV3-15A0A0B4J1V0 119 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 LOC102725191A0A1B0GVB3 256 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 ZNF593O00488 134 aaPredicted RBP19.16■□□□□ 0.66
SPAST-204ENST00000621856 CDK2AP1O14519 115 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 EIF1AYO14602 144 aaKnown RBP19.16■□□□□ 0.66
SPAST-204ENST00000621856 PHYHO14832 338 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 SP1P08047 785 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 TACSTD2P09758 323 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 POU3F2P20265 443 aaPredicted RBP19.16■□□□□ 0.66
SPAST-204ENST00000621856 EDNRAP25101 427 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 PSMB10P40306 273 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 RPS27P42677 84 aaKnown RBP19.16■□□□□ 0.66
SPAST-204ENST00000621856 CD97P48960 835 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 SOX8P57073 446 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 PLGLB1Q02325 96 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 MXD1Q05195 221 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 MFAP5Q13361 173 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 TRAM1Q15629 374 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 OTPQ5XKR4 325 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 DMKNQ6E0U4 476 aaPredicted RBP19.16■□□□□ 0.66
SPAST-204ENST00000621856 SLC25A25Q6KCM7 469 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 MDS2Q8NDY4 140 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 OR6Q1Q8NGQ2 317 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 RBP7Q96R05 134 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 MRPL22Q9NWU5 206 aaKnown RBP19.16■□□□□ 0.66
SPAST-204ENST00000621856 KLHL13Q9P2N7 655 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 IKZF2Q9UKS7 526 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 CNTRLQ7Z7A1 2325 aa19.16■□□□□ 0.66
SPAST-204ENST00000621856 KIAA1549Q9HCM3 1950 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 SLC35F4A4IF30 521 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 PRR32B1ATL7 298 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 CENPBD1B2RD01 187 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 OGG1O15527 345 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 IGHG1P01857 330 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 SPARCP09486 303 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 OR8G3PP0DMU2 310 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 WT1P19544 449 aaPredicted RBP19.15■□□□□ 0.66
SPAST-204ENST00000621856 GALP22466 123 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 CLDN20P56880 219 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 SIRPAP78324 504 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 ADAM8P78325 824 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 H3F3AP84243 136 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 CAMK2DQ13557 499 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 LINC00299Q6ZSB3 139 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 YIPF7Q8N8F6 280 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 NOXO1Q8NFA2 376 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 SLC25A44Q96H78 314 aaPredicted RBP19.15■□□□□ 0.66
SPAST-204ENST00000621856 DCLRE1CQ96SD1 692 aaKnown RBP19.15■□□□□ 0.66
SPAST-204ENST00000621856 CDADC1Q9BWV3 514 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 C6orf62Q9GZU0 229 aaPredicted RBP19.15■□□□□ 0.66
SPAST-204ENST00000621856 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.15■□□□□ 0.66
SPAST-204ENST00000621856 ZNF703Q9H7S9 590 aaPredicted RBP19.15■□□□□ 0.66
SPAST-204ENST00000621856 SIAEQ9HAT2 523 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 KCNG2Q9UJ96 466 aa19.15■□□□□ 0.66
SPAST-204ENST00000621856 ZNF726A6NNF4 738 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms