RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 TMEM11P17152 192 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 PRKACAP17612 351 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 USF2Q15853 346 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-219ENST00000620786 Q499Y3 187 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 BRICD5Q6PL45 260 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 FAM185AQ8N0U4 392 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 ZNF511Q8NB15 262 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 TSSK2Q96PF2 358 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 DUSP22Q9NRW4 184 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 A0A096LPE4 126 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 SPTY2D1-AS1A0A0U1RR47 76 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 A0A1W2PPZ6 126 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 H3BMQ9 156 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 HLA-AP01891 365 aaKnown RBP10.44□□□□□ -0.74
CLIP1-219ENST00000620786 CRYABP02511 175 aaKnown RBP10.44□□□□□ -0.74
CLIP1-219ENST00000620786 IDH3GP51553 393 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-219ENST00000620786 RPS25P62851 125 aaKnown RBP10.44□□□□□ -0.74
CLIP1-219ENST00000620786 EMX1Q04741 257 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-219ENST00000620786 MFGE8Q08431 387 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-219ENST00000620786 SAXO2Q658L1 398 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 CGB2Q6NT52 195 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 NAXDQ8IW45 347 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 SLAMF9Q96A28 289 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 TEX101Q9BY14 249 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 IL21Q9HBE4 155 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 WSB2Q9NYS7 404 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-219ENST00000620786 TIMM10BQ9Y5J6 103 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 PTTG1O95997 202 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 ZNF93P35789 620 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-219ENST00000620786 GNB1P62873 340 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 SLC35D3Q5M8T2 416 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 BBS1Q8NFJ9 593 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 STK35Q8TDR2 534 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 OR14A2Q96R54 314 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 PRRX2Q99811 253 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 C7orf50Q9BRJ6 194 aaKnown RBP10.43□□□□□ -0.74
CLIP1-219ENST00000620786 LAT2Q9GZY6 243 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 EFSO43281 561 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 LCMT2O60294 686 aaKnown RBP10.43□□□□□ -0.74
CLIP1-219ENST00000620786 GLCEO94923 617 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 CRYAAP02489 173 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 HTR1FP30939 366 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 MAP2K6P52564 334 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 ZNF674Q2M3X9 581 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 TRILQ7L0X0 811 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 C12orf45Q8N5I9 185 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-219ENST00000620786 FAM71CQ8NEG0 241 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 TMEM106AQ96A25 262 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 MVB12AQ96EY5 273 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 MYEOVQ96EZ4 313 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 HYLS1Q96M11 299 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 OR2B2Q9GZK3 357 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 GPR173Q9NS66 373 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 QPCTLQ9NXS2 382 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 DDX60LQ5H9U9 1706 aaKnown RBP10.43□□□□□ -0.74
CLIP1-219ENST00000620786 TAF1P21675 1872 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 C17orf112F2Z3M2 114 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 GFYI3L273 518 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 M0R296 226 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 PIAS2O75928 621 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 ZIC2O95409 532 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-219ENST00000620786 SLC2A1P11166 492 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 GABRA5P31644 462 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 TFF2Q03403 129 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 NHSL2Q5HYW2 709 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 CLVS2Q5SYC1 327 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 ANKRD16Q6P6B7 361 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 CADM4Q8NFZ8 388 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 OR2T35Q8NGX2 323 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 GHSRQ92847 366 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 TMIGD2Q96BF3 282 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 C20orf27Q9GZN8 174 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 C5orf49A4QMS7 147 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 LMO7DNF2Z398 122 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 CXCL13O43927 109 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 VAMP5O95183 116 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 SNRPBP14678 240 aaKnown RBP10.43□□□□□ -0.74
CLIP1-219ENST00000620786 IL9P15248 144 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 SNRPD2P62316 118 aaKnown RBP10.43□□□□□ -0.74
CLIP1-219ENST00000620786 APOOLQ6UXV4 268 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 SLC43A2Q8N370 569 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 ABHD11Q8NFV4 315 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 INTS12Q96CB8 462 aaKnown RBP10.43□□□□□ -0.74
CLIP1-219ENST00000620786 ABHD6Q9BV23 337 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 TSPAN11A1L157 253 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 UPK1BO75841 260 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 CDK4P11802 303 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 GIFP27352 417 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 ALDH3B1P43353 468 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 PPICP45877 212 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 SMN1Q16637 294 aaKnown RBP10.43□□□□□ -0.74
CLIP1-219ENST00000620786 SHEQ5VZ18 495 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 ELP2Q6IA86 826 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 GUSBP11Q6P575 273 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 TMEM207Q6UWW9 146 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 OR7G2Q8NG99 324 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 ZNF583Q96ND8 569 aa10.43□□□□□ -0.74
CLIP1-219ENST00000620786 TJP1Q07157 1748 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 T-ENOLP0DO92 83 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 RAB11AP62491 216 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms