RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 PNPLA2Q96AD5 504 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 LPAR5Q9H1C0 372 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 FOXJ2Q9P0K8 574 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 IL36AQ9UHA7 158 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 KDELR3O43731 214 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 KCNIP4Q6PIL6 250 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 Q6ZVU0 165 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 AMZ2Q86W34 360 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 OR5L1Q8NGL2 311 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 IL1F10Q8WWZ1 152 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 UBQLN4Q9NRR5 601 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 TAS2R4Q9NYW5 299 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 ZDHHC8Q9ULC8 765 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 TNS2Q63HR2 1409 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 HIDE1A8MVS5 230 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 FGF7P21781 194 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 RBMXL1Q96E39 390 aaKnown RBP4.64□□□□□ -1.67
VPS13D-214ENST00000620676 PARD6GQ9BYG4 376 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-214ENST00000620676 CHST8Q9H2A9 424 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 FXYD1O00168 92 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 WNT10BO00744 389 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 S1PR1P21453 382 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 TBPL1P62380 186 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 ALG10BQ5I7T1 473 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 UBQLN3Q9H347 655 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 SELENOKQ9Y6D0 94 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 AFMIDQ63HM1 303 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 APCDD1LQ8NCL9 501 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 BPIFA2Q96DR5 249 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 PCYT2Q99447 389 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 ARNTLO00327 626 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 VRK3Q8IV63 474 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 C15orf54Q8N8G6 183 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 FMN2Q9NZ56 1722 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 GPANK1O95872 356 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 XCR1P46094 333 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 DIO1P49895 249 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 TAS2R60P59551 318 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 RAB39BQ96DA2 213 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 CASD1Q96PB1 797 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 IGFLR1Q9H665 355 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 ABRACLQ9P1F3 81 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 DUOX1Q9NRD9 1551 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 SSSCA1O60232 199 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 H2AFB1P0C5Y9 115 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 CEBPEQ15744 281 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 ENTPD8Q5MY95 495 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 NSUN5P2Q63ZY6 315 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 RANBP10Q6VN20 620 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 OR51Q1Q8NH59 317 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 ZAR1LA6NP61 321 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 IRAK2O43187 625 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 UBE2G2P60604 165 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 ERVS71-1P61550 626 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 PPP1R1CQ8WVI7 109 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 KCTD13Q8WZ19 329 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 BTNL2Q9UIR0 455 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 MED16Q9Y2X0 877 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 A3GALT2U3KPV4 340 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 MDFIC2A0A1B0GVS7 189 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 SYT7O43581 403 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 RPS27P42677 84 aaKnown RBP4.64□□□□□ -1.67
VPS13D-214ENST00000620676 SEMA3BQ13214 749 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 FAM26DQ5JW98 314 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 KIAA0319Q5VV43 1072 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 FAHD1Q6P587 224 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF880Q6PDB4 577 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 MSRB3Q8IXL7 192 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 OR4C16Q8NGL9 310 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 SNIP1Q8TAD8 396 aaKnown RBP4.64□□□□□ -1.67
VPS13D-214ENST00000620676 RLN3Q8WXF3 142 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 TECTBQ96PL2 329 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 RARRES2Q99969 163 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 KPTNQ9Y664 436 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 A0A1B0GTH9 108 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 SLC38A8A6NNN8 435 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 CA12O43570 354 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF623O75123 536 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 HINT1P49773 126 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF66Q6ZN08 573 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 PUSL1Q8N0Z8 303 aaKnown RBP4.64□□□□□ -1.67
VPS13D-214ENST00000620676 DUSP18Q8NEJ0 188 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 OR6T1Q8NGN1 323 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 NUS1Q96E22 293 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 ATOH8Q96SQ7 321 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 TGIF2-C20orf24A0A0A6YYL0 155 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 PSMB6P28072 239 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 RIDAP52758 137 aaKnown RBP4.64□□□□□ -1.67
VPS13D-214ENST00000620676 CLRN1P58418 232 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF79Q15937 498 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 MDGA2Q7Z553 956 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 NANOS1Q8WY41 292 aaKnown RBP4.64□□□□□ -1.67
VPS13D-214ENST00000620676 UBXN10Q96LJ8 280 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 OR8B4Q96RC9 309 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 DDA1Q9BW61 102 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 PDE7BQ9NP56 450 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 F13BP05160 661 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 PLK3Q9H4B4 646 aa4.64□□□□□ -1.67
VPS13D-214ENST00000620676 MTHFD2LQ9H903 347 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-214ENST00000620676 STEAP1Q9UHE8 339 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 857.1 ms