RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 TMEM54Q969K7 222 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 FOXN4Q96NZ1 517 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 MBOAT4Q96T53 435 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 NMNAT3Q96T66 252 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 PIGMQ9H3S5 423 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 RIBC2Q9H4K1 309 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 CRLF2Q9HC73 371 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 KCNJ16Q9NPI9 418 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 USE1Q9NZ43 259 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 GLTPQ9NZD2 209 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 CASQ2O14958 399 aaPredicted RBP12□□□□□ -0.49
NEK3-210ENST00000620675 TXNDC12O95881 172 aa12□□□□□ -0.49
NEK3-210ENST00000620675 AGAP20933 346 aa12□□□□□ -0.49
NEK3-210ENST00000620675 CSNK1A1P48729 337 aa12□□□□□ -0.49
NEK3-210ENST00000620675 ASCL1P50553 236 aa12□□□□□ -0.49
NEK3-210ENST00000620675 CDK5Q00535 292 aa12□□□□□ -0.49
NEK3-210ENST00000620675 ROR2Q01974 943 aaKnown RBP12□□□□□ -0.49
NEK3-210ENST00000620675 PTGES3Q15185 160 aaKnown RBP12□□□□□ -0.49
NEK3-210ENST00000620675 HIST3H3Q16695 136 aa12□□□□□ -0.49
NEK3-210ENST00000620675 PGGHGQ32M88 737 aa12□□□□□ -0.49
NEK3-210ENST00000620675 OGFRL1Q5TC84 451 aaPredicted RBP12□□□□□ -0.49
NEK3-210ENST00000620675 LNX2Q8N448 690 aa12□□□□□ -0.49
NEK3-210ENST00000620675 GPR35Q9HC97 309 aa12□□□□□ -0.49
NEK3-210ENST00000620675 UPB1Q9UBR1 384 aa12□□□□□ -0.49
NEK3-210ENST00000620675 ABCA12Q86UK0 2595 aa12□□□□□ -0.49
NEK3-210ENST00000620675 OR6C68A6NDL8 312 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 ARPC3O15145 178 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 GPANK1O95872 356 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 IGHG1P01857 330 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 QDPRP09417 244 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 RPS6KA3P51812 740 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 CLRN1P58418 232 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 CD47Q08722 323 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 NPRL3Q12980 569 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 CEACAM16Q2WEN9 425 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 FBXW10Q5XX13 1052 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 OR2T33Q8NG76 320 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 OR52E2Q8NGJ4 325 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 ZNRF4Q8WWF5 429 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 MCHR2Q969V1 340 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 ADAD1Q96M93 576 aaKnown RBP11.99□□□□□ -0.49
NEK3-210ENST00000620675 SYT4Q9H2B2 425 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 TOR3AQ9H497 397 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 ASB6Q9NWX5 421 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 FLNBO75369 2602 aaKnown RBP11.99□□□□□ -0.49
NEK3-210ENST00000620675 A0A1W2PR80 420 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 SLC22A23A1A5C7 686 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 PRSS37A4D1T9 235 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 FAM183AA6NL82 134 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 CTLA4P16410 223 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 COX5AP20674 150 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 NOS3P29474 1203 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.99□□□□□ -0.49
NEK3-210ENST00000620675 RPL13AP3Q6NVV1 102 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 LEG1Q6P5S2 330 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 GPR137CQ8N3F9 429 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 ZNF433Q8N7K0 673 aaPredicted RBP11.99□□□□□ -0.49
NEK3-210ENST00000620675 NPEPL1Q8NDH3 523 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 NSMAFQ92636 917 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 DDOQ99489 341 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 HCAR1Q9BXC0 346 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 GABARAPL3Q9BY60 117 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 ULBP2Q9BZM5 246 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 LINC00470Q9BZP3 86 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 NELFAQ9H3P2 528 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 MED20Q9H944 212 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 GPR52Q9Y2T5 361 aa11.99□□□□□ -0.49
NEK3-210ENST00000620675 FBN2P35556 2912 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 ZAR1LA6NP61 321 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 FAM171A2A8MVW0 826 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 AKAP8O43823 692 aaKnown RBP11.98□□□□□ -0.49
NEK3-210ENST00000620675 RAD51DO75771 328 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 KRT33AO76009 404 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 CLUP10909 449 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 APEHP13798 732 aaKnown RBP11.98□□□□□ -0.49
NEK3-210ENST00000620675 CDAP32320 146 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 CD79BP40259 229 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 RIPK1Q13546 671 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 CRMP1Q14194 572 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 TAF11Q15544 211 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 FBXL19-AS1Q494R0 122 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 GPR139Q6DWJ6 353 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 SLC27A4Q6P1M0 643 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 BEND4Q6ZU67 534 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 POMGNT2Q8NAT1 580 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 SLC37A3Q8NCC5 494 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 UBE2FQ969M7 185 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 LRR1Q96L50 414 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 RERGLQ9H628 205 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 A0A096LPE4 126 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 A0A1W2PPZ6 126 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 ZNF587BE7ETH6 402 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 SCG5P05408 212 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 GYPBP06028 91 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 COL8A1P27658 744 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 ESRRGP62508 458 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 ARF1P84077 181 aaKnown RBP11.98□□□□□ -0.49
NEK3-210ENST00000620675 HIKESHIQ53FT3 197 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 SFRP5Q5T4F7 317 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 SLC25A47Q6Q0C1 308 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms