RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 SDK1Q7Z5N4 2213 aa2.37□□□□□ -2.03
MALAT1-216ENST00000620465 DENND4CQ5VZ89 1909 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 C2orf16Q68DN1 1984 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 CNOT1A5YKK6 2376 aaKnown RBP2.36□□□□□ -2.03
MALAT1-216ENST00000620465 SCN1AP35498 2009 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 EP300Q09472 2414 aaPredicted RBP2.36□□□□□ -2.03
MALAT1-216ENST00000620465 IGHV3OR16-13A0A075B7E8 117 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 PANO1I0J062 215 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 SLC16A4O15374 487 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 HCRTR1O43613 425 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 TPM2P07951 284 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 ALOX5P09917 674 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 RBMY1CP0DJD4 496 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 PNMTP11086 282 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 NR2C1P13056 603 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 TNNI1P19237 187 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 SYT1P21579 422 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 MMP11P24347 488 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 CD1BP29016 333 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 P2RY1P47900 373 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 SLC11A1P49279 550 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 ZNF133P52736 654 aaPredicted RBP2.36□□□□□ -2.03
MALAT1-216ENST00000620465 APOC4P55056 127 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 YWHAEP62258 255 aaKnown RBP2.36□□□□□ -2.03
MALAT1-216ENST00000620465 RPL10AP62906 217 aaKnown RBP2.36□□□□□ -2.03
MALAT1-216ENST00000620465 SIGLEC14Q08ET2 396 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 GANABQ14697 944 aaKnown RBP2.36□□□□□ -2.03
MALAT1-216ENST00000620465 GPNMBQ14956 572 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 NSDHLQ15738 373 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 CLLU1OSQ5K130 101 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 C10orf120Q5SQS8 335 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 C1orf146Q5VVC0 180 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 CES3Q6UWW8 571 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 GET4Q7L5D6 327 aaPredicted RBP2.36□□□□□ -2.03
MALAT1-216ENST00000620465 GDPD3Q7L5L3 318 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 TMCO2Q7Z6W1 182 aaPredicted RBP2.36□□□□□ -2.03
MALAT1-216ENST00000620465 TMEM86AQ8N2M4 240 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 ANKFN1Q8N957 763 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 ZNF740Q8NDX6 193 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 OR2T34Q8NGX1 318 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 OR1F12Q8NHA8 337 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 TRMT10AQ8TBZ6 339 aaKnown RBP2.36□□□□□ -2.03
MALAT1-216ENST00000620465 SPPL2BQ8TCT7 592 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 HTR3CQ8WXA8 447 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 RLN3Q8WXF3 142 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 ST8SIA1Q92185 356 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 PELI1Q96FA3 418 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 MSANTD3Q96H12 275 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 SLC35E1Q96K37 410 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 CCNL2Q96S94 520 aaPredicted RBP2.36□□□□□ -2.03
MALAT1-216ENST00000620465 TBX15Q96SF7 602 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 ZNF670Q9BS34 389 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 CWH43Q9H720 699 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 PLGRKTQ9HBL7 147 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 IL36GQ9NZH8 169 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 PIPOXQ9P0Z9 390 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 SNX6Q9UNH7 406 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 ERVW-1Q9UQF0 538 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 MRPS33Q9Y291 106 aaKnown RBP2.36□□□□□ -2.03
MALAT1-216ENST00000620465 SLCO1B1Q9Y6L6 691 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 ATG2AQ2TAZ0 1938 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 TECTAO75443 2155 aa2.36□□□□□ -2.03
MALAT1-216ENST00000620465 LRRK1Q38SD2 2015 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 PLXNA3P51805 1871 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 RANBP2P49792 3224 aaKnown RBP2.35□□□□□ -2.03
MALAT1-216ENST00000620465 SPTBN4Q9H254 2564 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 VWA8A3KMH1 1905 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 A0A0G2JRQ6 117 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 A0A1B0GUS0 222 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 PVALEFA0A1B0GWK0 134 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 LRP5LA4QPB2 252 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 PSMB11A5LHX3 300 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 TMEM150BA6NC51 233 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 USP27XA6NNY8 438 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 K7EQM0 130 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 SLC9A3R1O14745 358 aaPredicted RBP2.35□□□□□ -2.03
MALAT1-216ENST00000620465 POLR2DO15514 142 aaKnown RBP2.35□□□□□ -2.03
MALAT1-216ENST00000620465 IGHG4P01861 327 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 IL9P15248 144 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 KCNE1P15382 129 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 COX5AP20674 150 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 IMPDH1P20839 514 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 PTMSP20962 102 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 HTR1EP28566 365 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 LAP3P28838 519 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 SYKP43405 635 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 ARPP19P56211 112 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 NUP107P57740 925 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 TNNC1P63316 161 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 TFAMQ00059 246 aaKnown RBP2.35□□□□□ -2.03
MALAT1-216ENST00000620465 GTF2BQ00403 316 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 DAZ2Q13117 558 aaKnown RBP2.35□□□□□ -2.03
MALAT1-216ENST00000620465 CAPRIN1Q14444 709 aaKnown RBP2.35□□□□□ -2.03
MALAT1-216ENST00000620465 ZNF630Q2M218 657 aaPredicted RBP2.35□□□□□ -2.03
MALAT1-216ENST00000620465 KLF17Q5JT82 389 aaPredicted RBP2.35□□□□□ -2.03
MALAT1-216ENST00000620465 TMEM225Q6GV28 225 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 C11orf71Q6IPW1 123 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 RNF165Q6ZSG1 346 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 CCDC50Q8IVM0 306 aa2.35□□□□□ -2.03
MALAT1-216ENST00000620465 SLC35F2Q8IXU6 374 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms