RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 HLA-DOBP13765 273 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 CBLP22681 906 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 GRPRP30550 384 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 LSP1P33241 339 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 ART1P52961 327 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 FAPQ12884 760 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 CYLC2Q14093 348 aaPredicted RBP6.52□□□□□ -1.37
CBWD1-228ENST00000619157 P2RY6Q15077 328 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 GABRA6Q16445 453 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 ALG10BQ5I7T1 473 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 ENTPD8Q5MY95 495 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 C9orf135Q5VTT2 229 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 FAM91A1Q658Y4 838 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 ULK3Q6PHR2 472 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 CASP12Q6UXS9 341 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 CREB3L2Q70SY1 520 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 BHLHA15Q7RTS1 189 aaPredicted RBP6.52□□□□□ -1.37
CBWD1-228ENST00000619157 SPATA21Q7Z572 469 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 PATL1Q86TB9 770 aaKnown RBP6.52□□□□□ -1.37
CBWD1-228ENST00000619157 RP9Q8TA86 221 aaKnown RBP6.52□□□□□ -1.37
CBWD1-228ENST00000619157 VANGL1Q8TAA9 524 aaPredicted RBP6.52□□□□□ -1.37
CBWD1-228ENST00000619157 TMEM45BQ96B21 275 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 APH1AQ96BI3 265 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 SLC25A36Q96CQ1 311 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 ZHX1-C8orf76Q96EF9 292 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 SLC41A3Q96GZ6 507 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 MOGAT1Q96PD6 335 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 ZNF607Q96SK3 696 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 MCHR1Q99705 422 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 FOXC2Q99958 501 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 ZNF426Q9BUY5 554 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 TRIM2Q9C040 744 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 AMBRA1Q9C0C7 1298 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 PCDHAC1Q9H158 963 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 ZNF226Q9NYT6 803 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 EMC3Q9P0I2 261 aa6.52□□□□□ -1.37
CBWD1-228ENST00000619157 TRAV36DV7A0A075B6V5 113 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 PRORSD1PA6NEY8 169 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 OR5H1A6NKK0 313 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 FAM220BPB1ANY3 271 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 MS4A18H0YCH9 400 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 GPR171O14626 319 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 AIM2O14862 343 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 CASKO14936 926 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 TRAF3IP2O43734 574 aaPredicted RBP6.51□□□□□ -1.37
CBWD1-228ENST00000619157 FMO6PO60774 539 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 MRPL33O75394 65 aaKnown RBP6.51□□□□□ -1.37
CBWD1-228ENST00000619157 UPK3AO75631 287 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 SERPINB7O75635 380 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 ZNF432O94892 652 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 NPPAP01160 153 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 RAF1P04049 648 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 PPP3CBP16298 524 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 IL32P24001 234 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 CLRN1P58418 232 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 SPOCK1Q08629 439 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 VEZF1Q14119 521 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 MAPRE2Q15555 327 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 STK11Q15831 433 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 ACKR1Q16570 336 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 DEFB113Q30KQ7 82 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 MS4A18Q3C1V0 323 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 MMEL1Q495T6 779 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 C19orf54Q5BKX5 351 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 BEX5Q5H9J7 111 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 PHYHD1Q5SRE7 291 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 NCMAPQ5T1S8 102 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 FAM69AQ5T7M9 428 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 ZNF704Q6ZNC4 412 aaPredicted RBP6.51□□□□□ -1.37
CBWD1-228ENST00000619157 TSEN54Q7Z6J9 526 aaKnown RBP6.51□□□□□ -1.37
CBWD1-228ENST00000619157 GPAT4Q86UL3 456 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 ZNF100Q8IYN0 542 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 TMEM123Q8N131 208 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 WDR31Q8NA23 367 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 WFDC11Q8NEX6 87 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 STEAP2Q8NFT2 490 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 ADAMTS16Q8TE57 1224 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 DNAJA4Q8WW22 397 aaPredicted RBP6.51□□□□□ -1.37
CBWD1-228ENST00000619157 SLC47A1Q96FL8 570 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 MUS81Q96NY9 551 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 ECSITQ9BQ95 431 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 NAA11Q9BSU3 229 aaPredicted RBP6.51□□□□□ -1.37
CBWD1-228ENST00000619157 SF3B5Q9BWJ5 86 aaKnown RBP6.51□□□□□ -1.37
CBWD1-228ENST00000619157 HDHD5Q9BXW7 423 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 FAM107BQ9H098 131 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 ARMC7Q9H6L4 198 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 MEPEQ9NQ76 525 aaPredicted RBP6.51□□□□□ -1.37
CBWD1-228ENST00000619157 SLC9A8Q9Y2E8 581 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 SLC25A15Q9Y619 301 aa6.51□□□□□ -1.37
CBWD1-228ENST00000619157 SVEP1Q4LDE5 3571 aa6.5□□□□□ -1.37
CBWD1-228ENST00000619157 ALPK2Q86TB3 2170 aa6.5□□□□□ -1.37
CBWD1-228ENST00000619157 SHISA9B4DS77 424 aa6.5□□□□□ -1.37
CBWD1-228ENST00000619157 CHP2O43745 196 aa6.5□□□□□ -1.37
CBWD1-228ENST00000619157 GGT1P19440 569 aa6.5□□□□□ -1.37
CBWD1-228ENST00000619157 DNASE1P24855 282 aa6.5□□□□□ -1.37
CBWD1-228ENST00000619157 KDELR2P33947 212 aa6.5□□□□□ -1.37
CBWD1-228ENST00000619157 OR1E2P47887 323 aa6.5□□□□□ -1.37
CBWD1-228ENST00000619157 GSK3BP49841 420 aa6.5□□□□□ -1.37
CBWD1-228ENST00000619157 SLC7A2P52569 658 aa6.5□□□□□ -1.37
CBWD1-228ENST00000619157 UGT2B15P54855 530 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms