RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 SLC1A3P43003 542 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 SLC15A1P46059 708 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 OR1E2P47887 323 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 RAB25P57735 213 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 RAC3P60763 192 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 VBP1P61758 197 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 LSM11P83369 360 aaKnown RBP eCLIP4.68□□□□□ -1.66
SHMT1-211ENST00000618902 IL1RL1Q01638 556 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 EGR4Q05215 589 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 ST3GAL4Q11206 333 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 FOXF2Q12947 444 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 MLLT11Q13015 90 aaPredicted RBP4.68□□□□□ -1.66
SHMT1-211ENST00000618902 DGCR6Q14129 220 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 PTGES3Q15185 160 aaKnown RBP4.68□□□□□ -1.66
SHMT1-211ENST00000618902 OR1Q1Q15612 314 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 TMEM176BQ3YBM2 270 aaPredicted RBP4.68□□□□□ -1.66
SHMT1-211ENST00000618902 ANKDD1AQ495B1 522 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF544Q6NX49 715 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 C5orf46Q6UWT4 87 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 WDR88Q6ZMY6 472 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 PTCHD4Q6ZW05 846 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 AHSA2Q719I0 299 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 GALNT5Q7Z7M9 940 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 ATG4DQ86TL0 474 aaPredicted RBP4.68□□□□□ -1.66
SHMT1-211ENST00000618902 CDH24Q86UP0 819 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 CCDC71Q8IV32 467 aaPredicted RBP4.68□□□□□ -1.66
SHMT1-211ENST00000618902 LIX1LQ8IVB5 337 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 MCEMP1Q8IX19 187 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 UBQLNLQ8IYU4 475 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 HS3ST5Q8IZT8 346 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 GDPD1Q8N9F7 314 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 ATP6V1C2Q8NEY4 427 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 OR2V1Q8NHB1 315 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 VANGL1Q8TAA9 524 aaPredicted RBP4.68□□□□□ -1.66
SHMT1-211ENST00000618902 RFKQ969G6 155 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 GMPPAQ96IJ6 420 aaPredicted RBP4.68□□□□□ -1.66
SHMT1-211ENST00000618902 ARL5BQ96KC2 179 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 DHRS1Q96LJ7 313 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 SNX18Q96RF0 628 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 MGLLQ99685 303 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 SLC30A2Q9BRI3 323 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 RNF122Q9H9V4 155 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 CACYBPQ9HB71 228 aaKnown RBP4.68□□□□□ -1.66
SHMT1-211ENST00000618902 SLC25A19Q9HC21 320 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 KRCC1Q9NPI7 259 aaPredicted RBP4.68□□□□□ -1.66
SHMT1-211ENST00000618902 SERINC1Q9NRX5 453 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 ALKBH4Q9NXW9 302 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 Q9UFV3 132 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF229Q9UJW7 825 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 ING1Q9UK53 422 aaPredicted RBP4.68□□□□□ -1.66
SHMT1-211ENST00000618902 SSR3Q9UNL2 185 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF232Q9UNY5 417 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 SLC9A8Q9Y2E8 581 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 GSTK1Q9Y2Q3 226 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 TMED7Q9Y3B3 224 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 EMC9Q9Y3B6 208 aa4.68□□□□□ -1.66
SHMT1-211ENST00000618902 FLNAP21333 2647 aaKnown RBP4.68□□□□□ -1.66
SHMT1-211ENST00000618902 IGHV3-15A0A0B4J1V0 119 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 A0A0B4J2E0 115 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 A0A1B0GX12 115 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 FAM172BPA6NC97 362 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 OR6C65A6NJZ3 312 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 SLC22A20A6NK97 555 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 A8MXE2 369 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 FTCDNL1E5RQL4 147 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 J3KTA2 159 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 J3QRK9 145 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 M0R082 166 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 EIF1AYO14602 144 aaKnown RBP4.67□□□□□ -1.66
SHMT1-211ENST00000618902 FFAR1O14842 300 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 MAGEB3O15480 346 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 EIF1BO60739 113 aaKnown RBP4.67□□□□□ -1.66
SHMT1-211ENST00000618902 MITFO75030 526 aaPredicted RBP4.67□□□□□ -1.66
SHMT1-211ENST00000618902 FZD7O75084 574 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 FADS2O95864 444 aaKnown RBP4.67□□□□□ -1.66
SHMT1-211ENST00000618902 HMGN1P05114 100 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 KRT8P05787 483 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 H1F0P07305 194 aaKnown RBP4.67□□□□□ -1.66
SHMT1-211ENST00000618902 TMIGD3P0DMS9 266 aaPredicted RBP4.67□□□□□ -1.66
SHMT1-211ENST00000618902 EPXP11678 715 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 BMP4P12644 408 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 CD53P19397 219 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 ENPP1P22413 925 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 FGF9P31371 208 aaPredicted RBP4.67□□□□□ -1.66
SHMT1-211ENST00000618902 TGFBR2P37173 567 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 LIPAP38571 399 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 KIR2DL3P43628 341 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 EIF1AXP47813 144 aaKnown RBP4.67□□□□□ -1.66
SHMT1-211ENST00000618902 EIF2B2P49770 351 aaKnown RBP4.67□□□□□ -1.66
SHMT1-211ENST00000618902 CDH12P55289 794 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 RGS8P57771 180 aaPredicted RBP4.67□□□□□ -1.66
SHMT1-211ENST00000618902 CSNK2A1P68400 391 aaPredicted RBP4.67□□□□□ -1.66
SHMT1-211ENST00000618902 SPIBQ01892 262 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 LTBQ06643 244 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 SCN1BQ07699 218 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 ACSM1Q08AH1 577 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 RAB40BQ12829 278 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 MYBPHQ13203 477 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 SELENBP1Q13228 472 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 SEC23BQ15437 767 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 472.6 ms