RNA–Protein interactions for RNA: ENST00000617451.4

PTPRF-216, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5 BASIC

Gene PTPRF, Length 1,129 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-216ENST00000617451 CH25HO95992 272 aa21.31■■□□□ 1
PTPRF-216ENST00000617451 CLPTM1O96005 669 aa21.31■■□□□ 1
PTPRF-216ENST00000617451 THY1P04216 161 aa21.31■■□□□ 1
PTPRF-216ENST00000617451 FAM157BP0CG42 384 aa21.31■■□□□ 1
PTPRF-216ENST00000617451 ZNF250P15622 560 aa21.31■■□□□ 1
PTPRF-216ENST00000617451 CFPP27918 469 aa21.31■■□□□ 1
PTPRF-216ENST00000617451 MAGEB1P43366 347 aa21.31■■□□□ 1
PTPRF-216ENST00000617451 SCGB2A2Q13296 93 aa21.31■■□□□ 1
PTPRF-216ENST00000617451 RUNDC3AQ59EK9 446 aa21.31■■□□□ 1
PTPRF-216ENST00000617451 ENTPD8Q5MY95 495 aa21.31■■□□□ 1
PTPRF-216ENST00000617451 C11orf65Q8NCR3 313 aa21.31■■□□□ 1
PTPRF-216ENST00000617451 GPR32P1Q8NGA4 272 aa21.31■■□□□ 1
PTPRF-216ENST00000617451 SLCO1B3Q9NPD5 702 aa21.31■■□□□ 1
PTPRF-216ENST00000617451 NANSQ9NR45 359 aa21.31■■□□□ 1
PTPRF-216ENST00000617451 IGLV3-9A0A075B6K5 115 aa21.3■■□□□ 1
PTPRF-216ENST00000617451 TRAV20A0A0B4J274 112 aa21.3■■□□□ 1
PTPRF-216ENST00000617451 CPSF4LA6NMK7 179 aaKnown RBP21.3■■□□□ 1
PTPRF-216ENST00000617451 C17orf100A8MU93 164 aa21.3■■□□□ 1
PTPRF-216ENST00000617451 M0QX08 132 aa21.3■■□□□ 1
PTPRF-216ENST00000617451 DHHO43323 396 aa21.3■■□□□ 1
PTPRF-216ENST00000617451 RNF13O43567 381 aa21.3■■□□□ 1
PTPRF-216ENST00000617451 ERLIN1O75477 346 aa21.3■■□□□ 1
PTPRF-216ENST00000617451 FARS2O95363 451 aaKnown RBP21.3■■□□□ 1
PTPRF-216ENST00000617451 PGA4P0DJD7 388 aa21.3■■□□□ 1
PTPRF-216ENST00000617451 PGA3P0DJD8 388 aa21.3■■□□□ 1
PTPRF-216ENST00000617451 ATP4BP51164 291 aa21.3■■□□□ 1
PTPRF-216ENST00000617451 SELENOVP59797 346 aa21.3■■□□□ 1
PTPRF-216ENST00000617451 MYBPC1Q00872 1141 aa21.3■■□□□ 1
PTPRF-216ENST00000617451 RUNX1T1Q06455 604 aa21.3■■□□□ 1
PTPRF-216ENST00000617451 SHQ1Q6PI26 577 aaKnown RBP21.3■■□□□ 1
PTPRF-216ENST00000617451 LRRC17Q8N6Y2 441 aa21.3■■□□□ 1
PTPRF-216ENST00000617451 HINT3Q9NQE9 182 aaKnown RBP21.3■■□□□ 1
PTPRF-216ENST00000617451 GPR160Q9UJ42 338 aa21.3■■□□□ 1
PTPRF-216ENST00000617451 SNAP29O95721 258 aa21.29■■□□□ 1
PTPRF-216ENST00000617451 OPN1SWP03999 348 aa21.29■■□□□ 1
PTPRF-216ENST00000617451 QDPRP09417 244 aa21.29■■□□□ 1
PTPRF-216ENST00000617451 CCL2P13500 99 aa21.29■■□□□ 1
PTPRF-216ENST00000617451 KLF3P57682 345 aaPredicted RBP21.29■■□□□ 1
PTPRF-216ENST00000617451 RBBP4Q09028 425 aa21.29■■□□□ 1
PTPRF-216ENST00000617451 MELKQ14680 651 aa21.29■■□□□ 1
PTPRF-216ENST00000617451 MMEL1Q495T6 779 aa21.29■■□□□ 1
PTPRF-216ENST00000617451 TMEM53Q6P2H8 277 aa21.29■■□□□ 1
PTPRF-216ENST00000617451 FAHD2BQ6P2I3 314 aaPredicted RBP21.29■■□□□ 1
PTPRF-216ENST00000617451 TTC33Q6PID6 262 aaPredicted RBP21.29■■□□□ 1
PTPRF-216ENST00000617451 DPPA2Q7Z7J5 298 aa21.29■■□□□ 1
PTPRF-216ENST00000617451 RBM45Q8IUH3 476 aaKnown RBP21.29■■□□□ 1
PTPRF-216ENST00000617451 OR4K5Q8NGD3 323 aa21.29■■□□□ 1
PTPRF-216ENST00000617451 OR4D11Q8NGI4 311 aa21.29■■□□□ 1
PTPRF-216ENST00000617451 SYNPRQ8TBG9 265 aa21.29■■□□□ 1
PTPRF-216ENST00000617451 ADAMTS16Q8TE57 1224 aa21.29■■□□□ 1
PTPRF-216ENST00000617451 FAHD2AQ96GK7 314 aa21.29■■□□□ 1
PTPRF-216ENST00000617451 TSPAN32Q96QS1 320 aa21.29■■□□□ 1
PTPRF-216ENST00000617451 C1orf198Q9H425 327 aa21.29■■□□□ 1
PTPRF-216ENST00000617451 ZNF229Q9UJW7 825 aa21.29■■□□□ 1
PTPRF-216ENST00000617451 CCL8P80075 99 aa21.28■■□□□ 1
PTPRF-216ENST00000617451 PCGF3Q3KNV8 242 aa21.28■■□□□ 1
PTPRF-216ENST00000617451 NRN1LQ496H8 165 aa21.28■■□□□ 1
PTPRF-216ENST00000617451 TMEM154Q6P9G4 183 aa21.28■■□□□ 1
PTPRF-216ENST00000617451 TSPYL5Q86VY4 417 aaPredicted RBP21.28■■□□□ 1
PTPRF-216ENST00000617451 ZNF519Q8TB69 540 aa21.28■■□□□ 1
PTPRF-216ENST00000617451 ZNF418Q8TF45 676 aaPredicted RBP21.28■■□□□ 1
PTPRF-216ENST00000617451 ZNF426Q9BUY5 554 aa21.28■■□□□ 1
PTPRF-216ENST00000617451 PLA2G12AQ9BZM1 189 aa21.28■■□□□ 1
PTPRF-216ENST00000617451 OR51B6Q9H340 312 aa21.28■■□□□ 1
PTPRF-216ENST00000617451 RNF121Q9H920 327 aa21.28■■□□□ 1
PTPRF-216ENST00000617451 CDH20Q9HBT6 801 aa21.28■■□□□ 1
PTPRF-216ENST00000617451 SLCO1C1Q9NYB5 712 aa21.28■■□□□ 1
PTPRF-216ENST00000617451 NKIRAS2Q9NYR9 191 aa21.28■■□□□ 1
PTPRF-216ENST00000617451 TRAPPC13A5PLN9 417 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 CDC14BO60729 498 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 PNPP00491 289 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 HIST1H2ABP04908 130 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 ASAH2BP0C7U1 165 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 ANPEPP15144 967 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 UCP2P55851 309 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 ERVS71-1P61550 626 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 HIST3H3Q16695 136 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 CYP51A1Q16850 503 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 SLC36A2Q495M3 483 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 THSD4Q6ZMP0 1018 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 C1orf229Q6ZS94 237 aaPredicted RBP21.27■■□□□ 1
PTPRF-216ENST00000617451 HIST3H2AQ7L7L0 130 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 LRRC8CQ8TDW0 803 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 SNX33Q8WV41 574 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 C11orf40Q8WZ69 217 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 HIST1H2ACQ93077 130 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 MPP4Q96JB8 637 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 SLC19A3Q9BZV2 496 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 G6PC2Q9NQR9 355 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 SLC7A7Q9UM01 511 aa21.27■■□□□ 1
PTPRF-216ENST00000617451 KPNA4O00629 521 aaPredicted RBP21.26■□□□□ 0.99
PTPRF-216ENST00000617451 ZNF500O60304 480 aaPredicted RBP21.26■□□□□ 0.99
PTPRF-216ENST00000617451 BCL10O95999 233 aa21.26■□□□□ 0.99
PTPRF-216ENST00000617451 PTHP01270 115 aa21.26■□□□□ 0.99
PTPRF-216ENST00000617451 IGHG1P01857 330 aa21.26■□□□□ 0.99
PTPRF-216ENST00000617451 LCKP06239 509 aa21.26■□□□□ 0.99
PTPRF-216ENST00000617451 CRYBB2P43320 205 aa21.26■□□□□ 0.99
PTPRF-216ENST00000617451 RAD52P43351 418 aa21.26■□□□□ 0.99
PTPRF-216ENST00000617451 COMPP49747 757 aaPredicted RBP21.26■□□□□ 0.99
PTPRF-216ENST00000617451 TBC1D28Q2M2D7 210 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms