RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 LRRC46Q96FV0 321 aa13.17□□□□□ -0.3
SHROOM1-208ENST00000617339 VSTM2LQ96N03 204 aa13.17□□□□□ -0.3
SHROOM1-208ENST00000617339 LDAHQ9H6V9 325 aa13.17□□□□□ -0.3
SHROOM1-208ENST00000617339 PRDM9Q9NQV7 894 aa13.17□□□□□ -0.3
SHROOM1-208ENST00000617339 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.17□□□□□ -0.3
SHROOM1-208ENST00000617339 IRGMA1A4Y4 181 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 SERINC4A6NH21 518 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 SRPX2O60687 465 aaPredicted RBP13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 ICOSLGO75144 302 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 NKX2-2O95096 273 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 NIPAL3Q6P499 406 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 OR56B4Q8NH76 319 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 OR11A1Q9GZK7 315 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 SLC6A15Q9H2J7 730 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 NTMQ9P121 344 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 RARRES3Q9UL19 164 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 MASP2O00187 686 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 GLAP06280 429 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 RAB3AP20336 220 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 HTR1FP30939 366 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 CTXN1P60606 82 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 PLCXD2Q0VAA5 305 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 TCEAL6Q6IPX3 200 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 SLITRK4Q8IW52 837 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 DUSP19Q8WTR2 217 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 GHSRQ92847 366 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 TCEAL3Q969E4 200 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 ZNF764Q96H86 408 aaPredicted RBP13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 AKIRIN1Q9H9L7 192 aaPredicted RBP13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 BABAM2Q9NXR7 383 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 KLRF1Q9NZS2 232 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 ATG2AQ2TAZ0 1938 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 DNAJC13O75165 2243 aa13.16□□□□□ -0.3
SHROOM1-208ENST00000617339 G3V3Y1 287 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 RP2O75695 350 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 PIAS2O75928 621 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 IGF2P01344 180 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 THBS2P35442 1172 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 GUSBP11Q6P575 273 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 FGD2Q7Z6J4 655 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 TRIM2Q9C040 744 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 ZNF304Q9HCX3 659 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 MRTO4Q9UKD2 239 aaKnown RBP13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 PRELID3BQ9Y3B1 194 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 ACOD1A6NK06 481 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 ADRB1P08588 477 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 FBXO45P0C2W1 286 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 GRK6P43250 576 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 MTNR1BP49286 362 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 GPR85P60893 370 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 CFHR1Q03591 330 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 HLXQ14774 488 aaPredicted RBP13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 FAM199XQ6PEV8 388 aaPredicted RBP13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 OR5M1Q8NGP8 315 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 OR1F2PQ96R84 312 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 IFT22Q9H7X7 185 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 EVA1AQ9H8M9 152 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 POLR1DQ9Y2S0 133 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 PCNX3Q9H6A9 2034 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 A0A0B4J2E0 115 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 A0A1B0GX12 115 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 BHLHE40O14503 412 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 FMO6PO60774 539 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 C4BPBP20851 252 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 TACR3P29371 465 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 AKR1C2P52895 323 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 AKR1C1Q04828 323 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 ULK3Q6PHR2 472 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 SLC35D2Q76EJ3 337 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 ZNF485Q8NCK3 441 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 CLRN3Q8NCR9 226 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 BVESQ8NE79 360 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 THEM6Q8WUY1 208 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 NUDT9Q9BW91 350 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 ULBP3Q9BZM4 244 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 ZCCHC4Q9H5U6 513 aa13.15□□□□□ -0.3
SHROOM1-208ENST00000617339 A0A087WV62 115 aa13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 KDM4EB2RXH2 506 aaPredicted RBP13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 LMO7DNF2Z398 122 aa13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 THBS1P07996 1170 aa13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 EDNRAP25101 427 aa13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 GPR3P46089 330 aa13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 PON3Q15166 354 aa13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 PRTGQ2VWP7 1150 aa13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 PTPMT1Q8WUK0 201 aaPredicted RBP13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 CTHRC1Q96CG8 243 aa13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 KTI12Q96EK9 354 aaPredicted RBP13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 CRB3Q9BUF7 120 aa13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 SEMA4CQ9C0C4 833 aa13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 TLCD2A6NGC4 264 aa13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 KLK3P07288 261 aaPredicted RBP13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 SBK2P0C263 348 aa13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 SLC6A6P31641 620 aa13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 CLDN6P56747 220 aa13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 CD300LDQ6UXZ3 194 aa13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 PDZD9Q8IXQ8 264 aa13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 STACQ99469 402 aa13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 ISYNA1Q9NPH2 558 aa13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 MYEF2Q9P2K5 600 aaKnown RBP13.14□□□□□ -0.31
SHROOM1-208ENST00000617339 THADAQ6YHU6 1953 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms