RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 IGDCC3Q8IVU1 814 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 C8orf59Q8N0T1 100 aaPredicted RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 METTL4Q8N3J2 472 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 LRRC18Q8N456 261 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 ZNF473Q8WTR7 871 aaKnown RBP3.06□□□□□ -1.92
LPP-220ENST00000617246 TTC9Q92623 222 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 NRN1Q9NPD7 142 aa3.06□□□□□ -1.92
LPP-220ENST00000617246 WASH4PA8MWX3 477 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 MAMLD1Q13495 774 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 PLBD1Q6P4A8 553 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 KBTBD8Q8NFY9 601 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 CMTM2Q8TAZ6 248 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 NEIL1Q96FI4 390 aaPredicted RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 AAMDCQ9H7C9 122 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 LRRC42Q9Y546 428 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 ALDOCP09972 364 aaKnown RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 ATXN1LP0C7T5 689 aaKnown RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 PSMB10P40306 273 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 GPR139Q6DWJ6 353 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 HIPK1Q86Z02 1210 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 C1orf52Q8N6N3 182 aaKnown RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 OR51I1Q9H343 314 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 KCNG2Q9UJ96 466 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 SF3B6Q9Y3B4 125 aaKnown RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 AP4S1Q9Y587 144 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 TRAV9-2A0A087WT02 112 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 TEX48A0A1B0GUV7 120 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 XKRY2A2RUG3 117 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 SLC22A5O76082 557 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 IFNA17P01571 189 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 PSMA1P25786 263 aaKnown RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 ACVRL1P37023 503 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 ADAM17P78536 824 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 AKR1C1Q04828 323 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 EBLN2Q6P2I7 272 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 IZUMO2Q6UXV1 221 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 TSEN54Q7Z6J9 526 aaKnown RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 ZSWIM9Q86XI8 627 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 FAM71AQ8IYT1 594 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 MECRQ9BV79 373 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 SNRNP70P08621 437 aaKnown RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 HOXB1P14653 301 aaPredicted RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 PRKACAP17612 351 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 RAB3AP20336 220 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 AWAT2Q6E213 333 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 BNIPLQ7Z465 357 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 TUSC5Q8IXB3 177 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 C12orf45Q8N5I9 185 aaPredicted RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 RHOXF1Q8NHV9 184 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 ACTRT1Q8TDG2 376 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 ZIC5Q96T25 663 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 HSD17B14Q9BPX1 270 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 LINC00597Q9H2U6 94 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 NOX3Q9HBY0 568 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 PTPRSQ13332 1948 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 E9PLN8 166 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 F6UZH7 168 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 OR5AC1P0C628 307 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 TAS2R20P59543 309 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 TRAF3Q13114 568 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 NCBP2-AS2Q69YL0 99 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 DDOQ99489 341 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 TSNAXQ99598 290 aaKnown RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 VKORC1Q9BQB6 163 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 PTPRHQ9HD43 1115 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 CTNSO60931 367 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 ABHD2P08910 425 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 NELFEP18615 380 aaKnown RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 IDH2P48735 452 aaKnown RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 MAGOHP61326 146 aaKnown RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 NPNTQ6UXI9 565 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 ZC3H3Q8IXZ2 948 aaKnown RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 TTC9BQ8N6N2 239 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 ROPN1LQ96C74 230 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 PAIP1Q9H074 479 aaKnown RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 EHD1Q9H4M9 534 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 ZNF665Q9H7R5 613 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 GNG8Q9UK08 70 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 SYT7O43581 403 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 DNPH1O43598 174 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 LMX1BO60663 402 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 DNAJB1P25685 340 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 ERVK-25P63136 954 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 ZNF770Q6IQ21 691 aaPredicted RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 MOB3CQ70IA8 216 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 ORAI1Q96D31 301 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 MSLNLQ96KJ4 702 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 NPY6RQ99463 290 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 OR11A1Q9GZK7 315 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 OPN3Q9H1Y3 402 aaPredicted RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 ZNF286AQ9HBT8 521 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 THAP1Q9NVV9 213 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 TMEFF2Q9UIK5 374 aaPredicted RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 TRAF3IP2O43734 574 aaPredicted RBP3.05□□□□□ -1.92
LPP-220ENST00000617246 ANGPTL7O43827 346 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 MED6O75586 246 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 OPRD1P41143 372 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 PRKXP51817 358 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 ACTBP60709 375 aa3.05□□□□□ -1.92
LPP-220ENST00000617246 EVX2Q03828 476 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms