RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 UBE2ZQ9H832 354 aaPredicted RBP16.29■□□□□ 0.2
ATXN2-227ENST00000616825 FAM212BQ9NTI7 297 aaPredicted RBP16.29■□□□□ 0.2
ATXN2-227ENST00000616825 RAB22AQ9UL26 194 aa16.29■□□□□ 0.2
ATXN2-227ENST00000616825 NDRG4Q9ULP0 352 aaKnown RBP16.29■□□□□ 0.2
ATXN2-227ENST00000616825 DOK2O60496 412 aa16.29■□□□□ 0.2
ATXN2-227ENST00000616825 PAPLNO95428 1278 aa16.29■□□□□ 0.2
ATXN2-227ENST00000616825 ZNF728P0DKX0 622 aa16.29■□□□□ 0.2
ATXN2-227ENST00000616825 RPL27P61353 136 aaKnown RBP16.29■□□□□ 0.2
ATXN2-227ENST00000616825 GRB2P62993 217 aaKnown RBP16.29■□□□□ 0.2
ATXN2-227ENST00000616825 ZNF836Q6ZNA1 936 aa16.29■□□□□ 0.2
ATXN2-227ENST00000616825 STT3BQ8TCJ2 826 aa16.29■□□□□ 0.2
ATXN2-227ENST00000616825 CNTNAP3Q9BZ76 1288 aa16.29■□□□□ 0.2
ATXN2-227ENST00000616825 BARHL1Q9BZE3 327 aa16.29■□□□□ 0.2
ATXN2-227ENST00000616825 TBX21Q9UL17 535 aa16.29■□□□□ 0.2
ATXN2-227ENST00000616825 PCDHGA5Q9Y5G8 931 aa16.29■□□□□ 0.2
ATXN2-227ENST00000616825 E9PI62 339 aa16.29■□□□□ 0.2
ATXN2-227ENST00000616825 NSA2O95478 260 aaKnown RBP16.29■□□□□ 0.2
ATXN2-227ENST00000616825 ATP1B1P05026 303 aa16.29■□□□□ 0.2
ATXN2-227ENST00000616825 CHATP28329 748 aa16.29■□□□□ 0.2
ATXN2-227ENST00000616825 SNRPGP62308 76 aaKnown RBP16.29■□□□□ 0.2
ATXN2-227ENST00000616825 TEAD3Q99594 435 aa16.29■□□□□ 0.2
ATXN2-227ENST00000616825 SIAEQ9HAT2 523 aa16.29■□□□□ 0.2
ATXN2-227ENST00000616825 SCN11AQ9UI33 1791 aa16.29■□□□□ 0.2
ATXN2-227ENST00000616825 NRXN3Q9Y4C0 1643 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 H7C1Q1 480 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 SBK2P0C263 348 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 EDDM3BP56851 147 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 RPS27AP62979 156 aaKnown RBP16.28■□□□□ 0.2
ATXN2-227ENST00000616825 UBA52P62987 128 aaKnown RBP16.28■□□□□ 0.2
ATXN2-227ENST00000616825 TMEM71Q6P5X7 295 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 BCDIN3DQ7Z5W3 292 aaKnown RBP16.28■□□□□ 0.2
ATXN2-227ENST00000616825 TDHQ8IZJ6 230 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 LIN37Q96GY3 246 aaPredicted RBP16.28■□□□□ 0.2
ATXN2-227ENST00000616825 SLC25A21Q9BQT8 299 aaPredicted RBP16.28■□□□□ 0.2
ATXN2-227ENST00000616825 SEMA4CQ9C0C4 833 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 HSBP1L1C9JCN9 74 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 M0R082 166 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 AKR7A3O95154 331 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 GABARAPO95166 117 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 BCKDHBP21953 392 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 PLA2G7Q13093 441 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 LIPNQ5VXI9 398 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 BRICD5Q6PL45 260 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 PIGTQ969N2 578 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 INTS12Q96CB8 462 aaKnown RBP16.28■□□□□ 0.2
ATXN2-227ENST00000616825 PPT2Q9UMR5 302 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 SNAPINO95295 136 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 ST6GAL1P15907 406 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 SLC6A12P48065 614 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 ANGPTL5Q86XS5 388 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 KIRREL1Q96J84 757 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 OCEL1Q9H607 264 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 ZMAT3Q9HA38 289 aaKnown RBP16.28■□□□□ 0.2
ATXN2-227ENST00000616825 COA3Q9Y2R0 106 aaPredicted RBP16.28■□□□□ 0.2
ATXN2-227ENST00000616825 MED6O75586 246 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 WNT11O96014 354 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 SLC2A1P11166 492 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 SYT13Q7L8C5 426 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 RBM45Q8IUH3 476 aaKnown RBP16.28■□□□□ 0.2
ATXN2-227ENST00000616825 ANKRD9Q96BM1 317 aaPredicted RBP16.28■□□□□ 0.2
ATXN2-227ENST00000616825 MENTQ9BUN1 341 aa16.28■□□□□ 0.2
ATXN2-227ENST00000616825 ENSAO43768 121 aaKnown RBP16.27■□□□□ 0.2
ATXN2-227ENST00000616825 TMPRSS11DO60235 418 aa16.27■□□□□ 0.2
ATXN2-227ENST00000616825 IGLV3-25P01717 112 aa16.27■□□□□ 0.2
ATXN2-227ENST00000616825 PPICP45877 212 aa16.27■□□□□ 0.2
ATXN2-227ENST00000616825 LGALS4P56470 323 aa16.27■□□□□ 0.2
ATXN2-227ENST00000616825 ADPRMQ3LIE5 342 aa16.27■□□□□ 0.2
ATXN2-227ENST00000616825 SHEQ5VZ18 495 aa16.27■□□□□ 0.2
ATXN2-227ENST00000616825 CST9LP1Q5W188 147 aa16.27■□□□□ 0.2
ATXN2-227ENST00000616825 HEPHL1Q6MZM0 1159 aa16.27■□□□□ 0.2
ATXN2-227ENST00000616825 TMEM81Q6P7N7 255 aa16.27■□□□□ 0.2
ATXN2-227ENST00000616825 ZNF687Q8N1G0 1237 aa16.27■□□□□ 0.2
ATXN2-227ENST00000616825 CCDC74AQ96AQ1 378 aa16.27■□□□□ 0.2
ATXN2-227ENST00000616825 KDM3BQ7LBC6 1761 aa16.27■□□□□ 0.2
ATXN2-227ENST00000616825 ZNF705FA8MVS1 300 aaPredicted RBP16.27■□□□□ 0.2
ATXN2-227ENST00000616825 SGCEO43556 437 aa16.27■□□□□ 0.2
ATXN2-227ENST00000616825 RGS11O94810 467 aa16.27■□□□□ 0.2
ATXN2-227ENST00000616825 ZNF705DP0CH99 300 aaPredicted RBP16.27■□□□□ 0.2
ATXN2-227ENST00000616825 ZNF705BP0CI00 300 aaPredicted RBP16.27■□□□□ 0.2
ATXN2-227ENST00000616825 PAN3Q58A45 887 aaKnown RBP16.27■□□□□ 0.2
ATXN2-227ENST00000616825 ATPAF1Q5TC12 328 aaPredicted RBP16.27■□□□□ 0.2
ATXN2-227ENST00000616825 HAS2Q92819 552 aa16.27■□□□□ 0.2
ATXN2-227ENST00000616825 THOC3Q96J01 351 aaKnown RBP16.27■□□□□ 0.2
ATXN2-227ENST00000616825 IP6K3Q96PC2 410 aa16.27■□□□□ 0.2
ATXN2-227ENST00000616825 EMC6Q9BV81 110 aa16.27■□□□□ 0.2
ATXN2-227ENST00000616825 TMEM30AQ9NV96 361 aa16.27■□□□□ 0.2
ATXN2-227ENST00000616825 NUPL2O15504 423 aaKnown RBP16.27■□□□□ 0.19
ATXN2-227ENST00000616825 PRICKLE3O43900 615 aaPredicted RBP16.27■□□□□ 0.19
ATXN2-227ENST00000616825 FADS1O60427 444 aa16.27■□□□□ 0.19
ATXN2-227ENST00000616825 GMDSO60547 372 aa16.27■□□□□ 0.19
ATXN2-227ENST00000616825 CSO75390 466 aaKnown RBP16.27■□□□□ 0.19
ATXN2-227ENST00000616825 TCRBP04435 133 aa16.27■□□□□ 0.19
ATXN2-227ENST00000616825 SNRNP70P08621 437 aaKnown RBP16.27■□□□□ 0.19
ATXN2-227ENST00000616825 NAGAP17050 411 aa16.27■□□□□ 0.19
ATXN2-227ENST00000616825 PIGAP37287 484 aa16.27■□□□□ 0.19
ATXN2-227ENST00000616825 PGFP49763 221 aa16.27■□□□□ 0.19
ATXN2-227ENST00000616825 CCR5P51681 352 aa16.27■□□□□ 0.19
ATXN2-227ENST00000616825 MC2RQ01718 297 aa16.27■□□□□ 0.19
ATXN2-227ENST00000616825 RNLSQ5VYX0 342 aa16.27■□□□□ 0.19
ATXN2-227ENST00000616825 ADGRE4PQ86SQ3 457 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms