RNA–Protein interactions for RNA: ENST00000616552.4

MCM3-207, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-207ENST00000616552 RUNX2Q13950 521 aa8.6□□□□□ -1.03
MCM3-207ENST00000616552 RAB33AQ14088 237 aa8.6□□□□□ -1.03
MCM3-207ENST00000616552 GAS6Q14393 721 aa8.6□□□□□ -1.03
MCM3-207ENST00000616552 ZNF234Q14588 700 aa8.6□□□□□ -1.03
MCM3-207ENST00000616552 ELAVL1Q15717 326 aaKnown RBP8.6□□□□□ -1.03
MCM3-207ENST00000616552 STEAP1BQ6NZ63 245 aa8.6□□□□□ -1.03
MCM3-207ENST00000616552 TMEM64Q6YI46 380 aa8.6□□□□□ -1.03
MCM3-207ENST00000616552 DPY19L4Q7Z388 723 aa8.6□□□□□ -1.03
MCM3-207ENST00000616552 SFTPA2Q8IWL1 248 aa8.6□□□□□ -1.03
MCM3-207ENST00000616552 TCEAL8Q8IYN2 117 aa8.6□□□□□ -1.03
MCM3-207ENST00000616552 ELP5Q8TE02 316 aa8.6□□□□□ -1.03
MCM3-207ENST00000616552 GLYATL2Q8WU03 294 aa8.6□□□□□ -1.03
MCM3-207ENST00000616552 UTP23Q9BRU9 249 aaKnown RBP8.6□□□□□ -1.03
MCM3-207ENST00000616552 PELI2Q9HAT8 420 aa8.6□□□□□ -1.03
MCM3-207ENST00000616552 MBD2Q9UBB5 411 aa8.6□□□□□ -1.03
MCM3-207ENST00000616552 MTFP1Q9UDX5 166 aa8.6□□□□□ -1.03
MCM3-207ENST00000616552 MUC3AQ02505 3323 aa8.6□□□□□ -1.03
MCM3-207ENST00000616552 TDRD6O60522 2096 aaKnown RBP8.6□□□□□ -1.03
MCM3-207ENST00000616552 TMEM82A0PJX8 343 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 DCDC2BA2VCK2 349 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 NAP1L6A6NFF2 107 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 GGT3PA6NGU5 568 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 LY86O95711 162 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 EFEMP2O95967 443 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 DCNP07585 359 aaKnown RBP8.59□□□□□ -1.03
MCM3-207ENST00000616552 H2AFB1P0C5Y9 115 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 RPA2P15927 270 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 PI3P19957 117 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 VAMP1P23763 118 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 DDX6P26196 483 aaKnown RBP eCLIP8.59□□□□□ -1.035e-6■■■□□ 15
MCM3-207ENST00000616552 CD1CP29017 333 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 CCKBRP32239 447 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 VIPR2P41587 438 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 DEFB103AP81534 67 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 TRAM1Q15629 374 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 C2orf76Q3KRA6 126 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 TMEM31Q5JXX7 168 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 CDPF1Q6NVV7 123 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 KIRREL2Q6UWL6 708 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 FOXRED2Q8IWF2 684 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 ETFBKMTQ8IXQ9 262 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 C10orf53Q8N6V4 93 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 NPEPL1Q8NDH3 523 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 OR2L5Q8NG80 312 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 OR5AK2Q8NH90 309 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 MOAP1Q96BY2 351 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 ZNF524Q96C55 264 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 C10orf90Q96M02 699 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 ADAD1Q96M93 576 aaKnown RBP8.59□□□□□ -1.03
MCM3-207ENST00000616552 NAA11Q9BSU3 229 aaPredicted RBP8.59□□□□□ -1.03
MCM3-207ENST00000616552 SLC25A32Q9H2D1 315 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 CHRDQ9H2X0 955 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 CHRNA9Q9UGM1 479 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 DTX4Q9Y2E6 619 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 TMED7Q9Y3B3 224 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 RP1L1Q8IWN7 2480 aaPredicted RBP8.59□□□□□ -1.03
MCM3-207ENST00000616552 TMEM235A6NFC5 223 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 ZNF749O43361 778 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 CLEC3AO75596 197 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 WISP1O95388 367 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 OR2T7P0C7T2 308 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 MGMTP16455 207 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 AKR1C4P17516 323 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 ARFIP1P53367 373 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 ATPAF1Q5TC12 328 aaPredicted RBP8.59□□□□□ -1.03
MCM3-207ENST00000616552 METRNLQ641Q3 311 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 UNQ9370/PRO34162Q6UXP9 181 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 TMPRSS11FQ6ZWK6 438 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 MTSS1LQ765P7 747 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 TMEM17Q86X19 198 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 PPP1R3BQ86XI6 285 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 LRRC25Q8N386 305 aaPredicted RBP8.59□□□□□ -1.03
MCM3-207ENST00000616552 OR5T2Q8NGG2 359 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 OR2T27Q8NH04 317 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 EDARADDQ8WWZ3 215 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 FAM46BQ96A09 425 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 AKAP7Q9P0M2 348 aaPredicted RBP8.59□□□□□ -1.03
MCM3-207ENST00000616552 SERGEFQ9UGK8 458 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 FGF17O60258 216 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 LMX1BO60663 402 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 WNT11O96014 354 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 IGKV1D-16P01601 117 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 NID1P14543 1247 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 RFC3P40938 356 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 CENPAP49450 140 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 C9orf152Q5JTZ5 239 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 VN1R4Q7Z5H5 301 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 ZNF676Q8N7Q3 588 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 ZSCAN1Q8NBB4 408 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 ADAD2Q8NCV1 583 aaKnown RBP8.59□□□□□ -1.03
MCM3-207ENST00000616552 OR51A2Q8NGJ7 313 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 RRNAD1Q96FB5 475 aaKnown RBP8.59□□□□□ -1.03
MCM3-207ENST00000616552 SLC6A7Q99884 636 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 ALG12Q9BV10 488 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 SLC19A3Q9BZV2 496 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 NDRG3Q9UGV2 375 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 DPP7Q9UHL4 492 aa8.59□□□□□ -1.03
MCM3-207ENST00000616552 DCHS1Q96JQ0 3298 aa8.59□□□□□ -1.04
MCM3-207ENST00000616552 A0A1B0GV50 99 aa8.58□□□□□ -1.04
MCM3-207ENST00000616552 MSGN1A6NI15 193 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms