RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 SLC35D3Q5M8T2 416 aa12.59□□□□□ -0.39
CACNA1C-231ENST00000616390 CLEC2AQ6UVW9 174 aa12.59□□□□□ -0.39
CACNA1C-231ENST00000616390 LANCL3Q6ZV70 420 aa12.59□□□□□ -0.39
CACNA1C-231ENST00000616390 SLC35F3Q8IY50 421 aa12.59□□□□□ -0.39
CACNA1C-231ENST00000616390 ZNF440Q8IYI8 595 aa12.59□□□□□ -0.39
CACNA1C-231ENST00000616390 OR11H7Q8NGC8 314 aa12.59□□□□□ -0.39
CACNA1C-231ENST00000616390 ADAMTS18Q8TE60 1221 aa12.59□□□□□ -0.39
CACNA1C-231ENST00000616390 ZNF578Q96N58 590 aaPredicted RBP12.59□□□□□ -0.39
CACNA1C-231ENST00000616390 ANKRD10Q9NXR5 420 aa12.59□□□□□ -0.39
CACNA1C-231ENST00000616390 WDFY4Q6ZS81 3184 aa12.59□□□□□ -0.39
CACNA1C-231ENST00000616390 A0A1W2PR77 199 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 IFITM5A6NNB3 132 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 GATCO43716 136 aaKnown RBP12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 ZNF217O75362 1048 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 SLC25A12O75746 678 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 ASAH2BP0C7U1 165 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 MMP15P51511 669 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 AP2S1P53680 142 aaPredicted RBP12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 PLCXD2Q0VAA5 305 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 BIKQ13323 160 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 FNDC7Q5VTL7 733 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 OVCH1Q7RTY7 1134 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 ZNF676Q8N7Q3 588 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 OR52I2Q8NH67 350 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 GRPEL2Q8TAA5 225 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 C1orf216Q8TAB5 229 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 SYNPRQ8TBG9 265 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 ZFAND1Q8TCF1 268 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 ZNF721Q8TF20 911 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 NSMAFQ92636 917 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 ATOH1Q92858 354 aaPredicted RBP12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 SNAPC3Q92966 411 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 MRPL48Q96GC5 212 aaKnown RBP12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 SLC46A1Q96NT5 459 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 CITED4Q96RK1 184 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 BCL2L14Q9BZR8 327 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 SLA2Q9H6Q3 261 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 SH3BGRL2Q9UJC5 107 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 V9GY05 133 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 TRAV20A0A0B4J274 112 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 LILRA5A6NI73 299 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 C10orf142B7Z368 130 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 SSNA1O43805 119 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 GMDSO60547 372 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 STOMP27105 288 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 RPP30P78346 268 aaKnown RBP12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 C14orf28Q4W4Y0 310 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 UBE2NLQ5JXB2 153 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 ARHGAP40Q5TG30 622 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 SLC16A9Q7RTY1 509 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 C9orf40Q8IXQ3 194 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 SLC43A2Q8N370 569 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 PPP1R14AQ96A00 147 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 AMELYQ99218 206 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 OR11A1Q9GZK7 315 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 KCNG2Q9UJ96 466 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 CAMK2AQ9UQM7 478 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 PCDHGA9Q9Y5G4 932 aaKnown RBP12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 COL6A3P12111 3177 aa12.58□□□□□ -0.4
CACNA1C-231ENST00000616390 BLACEA4D250 179 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 KHDRBS3O75525 346 aaKnown RBP12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 TOXO94900 526 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 DDAH2O95865 285 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 TACSTD2P09758 323 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 TMIGD3P0DMS9 266 aaPredicted RBP12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 CAPZA2P47755 286 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 HNRNPKP61978 463 aaKnown RBP eCLIP12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 ALKBH1Q13686 389 aaKnown RBP12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 PPA1Q15181 289 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 ETFDHQ16134 617 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 TMEM255AQ5JRV8 349 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 LIN54Q6MZP7 749 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 LYPD8Q6UX82 237 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 LRRN1Q6UXK5 716 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 TMPRSS12Q86WS5 348 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 LRRC75AQ8NAA5 344 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 ADIPOR1Q96A54 375 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 LRFN5Q96NI6 719 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 SLC19A3Q9BZV2 496 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 OR51J1Q9H342 316 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 SYNDIG1Q9H7V2 258 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 CEP192Q8TEP8 1941 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 TMEM127O75204 238 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 ZNF780AO75290 641 aaPredicted RBP12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 ITGA10O75578 1167 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 RENP00797 406 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 H2AFB2P0C5Z0 115 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 RAB14P61106 215 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 GALK2Q01415 458 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 CFHR1Q03591 330 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 PLA2G7Q13093 441 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 FAM199XQ6PEV8 388 aaPredicted RBP12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 STAC2Q6ZMT1 411 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 CARFQ8N187 725 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 FAM71CQ8NEG0 241 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 METTL21AQ8WXB1 218 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 RNF166Q96A37 237 aaPredicted RBP12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 ZNF285Q96NJ3 590 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 OR10A4Q9H209 315 aa12.57□□□□□ -0.4
CACNA1C-231ENST00000616390 XKRYO14609 159 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms