RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 ARMC4Q5T2S8 1044 aa11.47□□□□□ -0.57
CCL4-201ENST00000613947 NXNL2Q5VZ03 156 aa11.47□□□□□ -0.57
CCL4-201ENST00000613947 ULK3Q6PHR2 472 aa11.47□□□□□ -0.57
CCL4-201ENST00000613947 P4HA3Q7Z4N8 544 aa11.47□□□□□ -0.57
CCL4-201ENST00000613947 GCNT2Q8N0V5 402 aa11.47□□□□□ -0.57
CCL4-201ENST00000613947 ZNF808Q8N4W9 903 aaPredicted RBP11.47□□□□□ -0.57
CCL4-201ENST00000613947 ATG16L2Q8NAA4 619 aa11.47□□□□□ -0.57
CCL4-201ENST00000613947 DNAJA4Q8WW22 397 aaPredicted RBP11.47□□□□□ -0.57
CCL4-201ENST00000613947 INTS12Q96CB8 462 aaKnown RBP11.47□□□□□ -0.57
CCL4-201ENST00000613947 DDIT4LQ96D03 193 aa11.47□□□□□ -0.57
CCL4-201ENST00000613947 TM9SF2Q99805 663 aa11.47□□□□□ -0.57
CCL4-201ENST00000613947 RHNO1Q9BSD3 238 aa11.47□□□□□ -0.57
CCL4-201ENST00000613947 CDCA4Q9BXL8 241 aa11.47□□□□□ -0.57
CCL4-201ENST00000613947 TIGARQ9NQ88 270 aa11.47□□□□□ -0.57
CCL4-201ENST00000613947 CNOT2Q9NZN8 540 aaKnown RBP11.47□□□□□ -0.57
CCL4-201ENST00000613947 KCNN3Q9UGI6 736 aa11.47□□□□□ -0.57
CCL4-201ENST00000613947 MCTS1Q9ULC4 181 aaKnown RBP11.47□□□□□ -0.57
CCL4-201ENST00000613947 HDGFL3Q9Y3E1 203 aa11.47□□□□□ -0.57
CCL4-201ENST00000613947 ZNF175Q9Y473 711 aa11.47□□□□□ -0.57
CCL4-201ENST00000613947 CRYBG3Q68DQ2 2970 aa11.47□□□□□ -0.57
CCL4-201ENST00000613947 PKDREJQ9NTG1 2253 aa11.47□□□□□ -0.57
CCL4-201ENST00000613947 ELOA3DA6NLF2 546 aaPredicted RBP11.46□□□□□ -0.57
CCL4-201ENST00000613947 HSPB2A8KAH6 182 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 SULT2B1O00204 365 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 ENPP1P22413 925 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 CHRNB4P30926 498 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 TNFSF8P32971 234 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 GRK5P34947 590 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 OR3A3P47888 321 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 AGFG1P52594 562 aaKnown RBP11.46□□□□□ -0.57
CCL4-201ENST00000613947 CDH12P55289 794 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 FOXF2Q12947 444 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 IKZF1Q13422 519 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 HSPB2Q16082 182 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 ZNF239Q16600 458 aaKnown RBP11.46□□□□□ -0.57
CCL4-201ENST00000613947 ELOA3BQ3SY89 546 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 ELMOD2Q8IZ81 293 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 ELOA3Q8NG57 546 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 ROBO4Q8WZ75 1007 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 CPNE4Q96A23 557 aaPredicted RBP11.46□□□□□ -0.57
CCL4-201ENST00000613947 PRRG4Q9BZD6 226 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 OR51E2Q9H255 320 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 RNF122Q9H9V4 155 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 SMURF1Q9HCE7 757 aa11.46□□□□□ -0.57
CCL4-201ENST00000613947 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.46□□□□□ -0.57
CCL4-201ENST00000613947 TMA7Q9Y2S6 64 aaKnown RBP11.46□□□□□ -0.57
CCL4-201ENST00000613947 SAMHD1Q9Y3Z3 626 aaKnown RBP11.46□□□□□ -0.57
CCL4-201ENST00000613947 SETXQ7Z333 2677 aaKnown RBP11.46□□□□□ -0.57
CCL4-201ENST00000613947 ANKHD1Q8IWZ3 2542 aaKnown RBP11.46□□□□□ -0.58
CCL4-201ENST00000613947 IGHV3-15A0A0B4J1V0 119 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 SH3D21A4FU49 640 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 A8MVM7 634 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 NPIPB7O75200 414 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 SYNGR4O95473 234 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 THY1P04216 161 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 PNMTP11086 282 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 KLK2P20151 261 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 AGAP20933 346 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 EGR4Q05215 589 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 SCN1BQ07699 218 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 ZNF613Q6PF04 617 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 DEF8Q6ZN54 512 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 CREB3L2Q70SY1 520 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 OR8H2Q8N162 312 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 CA5BP1Q8WTZ4 195 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 HSH2DQ96JZ2 352 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 CENPOQ9BU64 300 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 POTEKPQ9BYX7 375 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 UCK2Q9BZX2 261 aa11.46□□□□□ -0.58
CCL4-201ENST00000613947 A0A087WUJ7 227 aa11.45□□□□□ -0.58
CCL4-201ENST00000613947 IQCMA0A1B0GVH7 501 aa11.45□□□□□ -0.58
CCL4-201ENST00000613947 EFCAB10A6NFE3 127 aa11.45□□□□□ -0.58
CCL4-201ENST00000613947 ZNF780AO75290 641 aaPredicted RBP11.45□□□□□ -0.58
CCL4-201ENST00000613947 TMIGD3P0DMS9 266 aaPredicted RBP11.45□□□□□ -0.58
CCL4-201ENST00000613947 GABRB1P18505 474 aa11.45□□□□□ -0.58
CCL4-201ENST00000613947 BMP5P22003 454 aa11.45□□□□□ -0.58
CCL4-201ENST00000613947 CSNK2A1P68400 391 aaPredicted RBP11.45□□□□□ -0.58
CCL4-201ENST00000613947 IL1RL1Q01638 556 aa11.45□□□□□ -0.58
CCL4-201ENST00000613947 PIN1Q13526 163 aaPredicted RBP11.45□□□□□ -0.58
CCL4-201ENST00000613947 OR2A2Q6IF42 318 aa11.45□□□□□ -0.58
CCL4-201ENST00000613947 STX19Q8N4C7 294 aa11.45□□□□□ -0.58
CCL4-201ENST00000613947 ASB5Q8WWX0 329 aa11.45□□□□□ -0.58
CCL4-201ENST00000613947 ZFP3Q96NJ6 502 aa11.45□□□□□ -0.58
CCL4-201ENST00000613947 PSMG3-AS1Q96PY0 264 aa11.45□□□□□ -0.58
CCL4-201ENST00000613947 SRRQ9GZT4 340 aa11.45□□□□□ -0.58
CCL4-201ENST00000613947 RASSF1Q9NS23 344 aa11.45□□□□□ -0.58
CCL4-201ENST00000613947 AASSQ9UDR5 926 aa11.45□□□□□ -0.58
CCL4-201ENST00000613947 ZNF629Q9UEG4 869 aaPredicted RBP11.45□□□□□ -0.58
CCL4-201ENST00000613947 PRELID1Q9Y255 219 aa11.45□□□□□ -0.58
CCL4-201ENST00000613947 V9GYH0 126 aa11.45□□□□□ -0.58
CCL4-201ENST00000613947 ALPK2Q86TB3 2170 aa11.45□□□□□ -0.58
CCL4-201ENST00000613947 IGKV1D-42A0A075B6H8 117 aa11.44□□□□□ -0.58
CCL4-201ENST00000613947 LOC100506127A0A0U1RQW1 187 aa11.44□□□□□ -0.58
CCL4-201ENST00000613947 A1L4Q6 167 aa11.44□□□□□ -0.58
CCL4-201ENST00000613947 TRAPPC13A5PLN9 417 aa11.44□□□□□ -0.58
CCL4-201ENST00000613947 CCDC182A6NF36 153 aa11.44□□□□□ -0.58
CCL4-201ENST00000613947 SSX4O60224 188 aa11.44□□□□□ -0.58
CCL4-201ENST00000613947 MPZL2O60487 215 aa11.44□□□□□ -0.58
CCL4-201ENST00000613947 TMCC2O75069 709 aa11.44□□□□□ -0.58
CCL4-201ENST00000613947 LYPD3O95274 346 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms