RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 CRMP1Q14194 572 aa12.99□□□□□ -0.33
CD48-203ENST00000613788 TFAP2EQ6VUC0 442 aa12.99□□□□□ -0.33
CD48-203ENST00000613788 BEND4Q6ZU67 534 aa12.99□□□□□ -0.33
CD48-203ENST00000613788 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.99□□□□□ -0.33
CD48-203ENST00000613788 MED12LQ86YW9 2145 aa12.99□□□□□ -0.33
CD48-203ENST00000613788 WDFY1Q8IWB7 410 aa12.99□□□□□ -0.33
CD48-203ENST00000613788 TCEANCQ8N8B7 351 aa12.99□□□□□ -0.33
CD48-203ENST00000613788 ZNF610Q8N9Z0 462 aa12.99□□□□□ -0.33
CD48-203ENST00000613788 SETD9Q8NE22 299 aa12.99□□□□□ -0.33
CD48-203ENST00000613788 OR8J1Q8NGP2 316 aa12.99□□□□□ -0.33
CD48-203ENST00000613788 MCHR2Q969V1 340 aa12.99□□□□□ -0.33
CD48-203ENST00000613788 ZNF184Q99676 751 aaPredicted RBP12.99□□□□□ -0.33
CD48-203ENST00000613788 ULBP2Q9BZM5 246 aa12.99□□□□□ -0.33
CD48-203ENST00000613788 SLC7A10Q9NS82 523 aa12.99□□□□□ -0.33
CD48-203ENST00000613788 DOCK7Q96N67 2140 aa12.99□□□□□ -0.33
CD48-203ENST00000613788 OR6C68A6NDL8 312 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 PRR23D1E9PI22 279 aaPredicted RBP12.98□□□□□ -0.33
CD48-203ENST00000613788 H7C1C5 153 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 TLX2O43763 284 aaPredicted RBP12.98□□□□□ -0.33
CD48-203ENST00000613788 MPZL2O60487 215 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 UPK3AO75631 287 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 IGHV3-9P01782 118 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 PRR23D2P0DMB1 279 aaPredicted RBP12.98□□□□□ -0.33
CD48-203ENST00000613788 EDNRAP25101 427 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 LCN6P62502 163 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 EFNB1P98172 346 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 FAPQ12884 760 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 DNM1P34Q6PK57 102 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 MRGPRGQ86SM5 289 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 CYB561A3Q8NBI2 242 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 TMEM163Q8TC26 289 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 DDOQ99489 341 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 SYT4Q9H2B2 425 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 H2AFY2Q9P0M6 372 aaPredicted RBP12.98□□□□□ -0.33
CD48-203ENST00000613788 MALT1Q9UDY8 824 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 PRSS50Q9UI38 385 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 RAB26Q9ULW5 256 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 GPR52Q9Y2T5 361 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 ESPL1Q14674 2120 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 CHD6Q8TD26 2715 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 EEF1E1-BLOC1S5C9J1V9 151 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 ZNF587BE7ETH6 402 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 RPL36A-HNRNPH2H7BZ11 118 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 EEF1E1O43324 174 aaKnown RBP12.98□□□□□ -0.33
CD48-203ENST00000613788 PRKYO43930 277 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 SLC16A7O60669 478 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 SLC25A1P53007 311 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 ROR2Q01974 943 aaKnown RBP12.98□□□□□ -0.33
CD48-203ENST00000613788 LGALS3BPQ08380 585 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 STK11Q15831 433 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 SLC25A35Q3KQZ1 300 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 C6orf52Q5T4I8 152 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 ZNF691Q5VV52 312 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 LRFN4Q6PJG9 635 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 Q6ZT83 130 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 CXXC5Q7LFL8 322 aaKnown RBP12.98□□□□□ -0.33
CD48-203ENST00000613788 LIX1LQ8IVB5 337 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 OR2T4Q8NH00 348 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 LILRB4Q8NHJ6 448 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 OTULINQ96BN8 352 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 MUS81Q96NY9 551 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 IL4I1Q96RQ9 567 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 NUAK2Q9H093 628 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 OPN3Q9H1Y3 402 aaPredicted RBP12.98□□□□□ -0.33
CD48-203ENST00000613788 CRLF2Q9HC73 371 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 GPR35Q9HC97 309 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 SRA1Q9HD15 236 aaKnown RBP12.98□□□□□ -0.33
CD48-203ENST00000613788 RPRD1BQ9NQG5 326 aaKnown RBP12.98□□□□□ -0.33
CD48-203ENST00000613788 FKBP7Q9Y680 259 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 HSPE1-MOB4S4R3N1 261 aa12.98□□□□□ -0.33
CD48-203ENST00000613788 A8MXE2 369 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 DHHO43323 396 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 KHDRBS3O75525 346 aaKnown RBP12.97□□□□□ -0.33
CD48-203ENST00000613788 AGAP20933 346 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 GUCA1AP43080 201 aaPredicted RBP12.97□□□□□ -0.33
CD48-203ENST00000613788 ZNF84P51523 738 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 ZNF133P52736 654 aaPredicted RBP12.97□□□□□ -0.33
CD48-203ENST00000613788 SNRPGP62308 76 aaKnown RBP12.97□□□□□ -0.33
CD48-203ENST00000613788 IL5RAQ01344 420 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 P2RY6Q15077 328 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 PHYHD1Q5SRE7 291 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 C10orf128Q5T292 105 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 PLBD1Q6P4A8 553 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 XKRXQ6PP77 449 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 SLC25A47Q6Q0C1 308 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 LUZP2Q86TE4 346 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 CPOQ8IVL8 374 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 C8orf59Q8N0T1 100 aaPredicted RBP12.97□□□□□ -0.33
CD48-203ENST00000613788 FAM26EQ8N5C1 309 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 CA5BP1Q8WTZ4 195 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 PTP4A1Q93096 173 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 NMD3Q96D46 503 aaKnown RBP12.97□□□□□ -0.33
CD48-203ENST00000613788 ALKBH3Q96Q83 286 aaPredicted RBP12.97□□□□□ -0.33
CD48-203ENST00000613788 RBM24Q9BX46 236 aaKnown RBP12.97□□□□□ -0.33
CD48-203ENST00000613788 NMNAT2Q9BZQ4 307 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 Q9H521 79 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 RERGLQ9H628 205 aa12.97□□□□□ -0.33
CD48-203ENST00000613788 HINT3Q9NQE9 182 aaKnown RBP12.97□□□□□ -0.33
CD48-203ENST00000613788 FAM183AA6NL82 134 aa12.96□□□□□ -0.33
CD48-203ENST00000613788 M0R129 80 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms