RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 VANGL1Q8TAA9 524 aaPredicted RBP15.25■□□□□ 0.03
SSBP1-215ENST00000612337 ZNF385DQ9H6B1 395 aa15.25■□□□□ 0.03
SSBP1-215ENST00000612337 ARGLU1Q9NWB6 273 aaPredicted RBP15.25■□□□□ 0.03
SSBP1-215ENST00000612337 DUSP13Q9UII6 198 aa15.25■□□□□ 0.03
SSBP1-215ENST00000612337 ZNF346Q9UL40 294 aaKnown RBP15.25■□□□□ 0.03
SSBP1-215ENST00000612337 SLC7A7Q9UM01 511 aa15.25■□□□□ 0.03
SSBP1-215ENST00000612337 KPNA4O00629 521 aaPredicted RBP15.24■□□□□ 0.03
SSBP1-215ENST00000612337 DHHO43323 396 aa15.24■□□□□ 0.03
SSBP1-215ENST00000612337 FARS2O95363 451 aaKnown RBP15.24■□□□□ 0.03
SSBP1-215ENST00000612337 HIST1H2ABP04908 130 aa15.24■□□□□ 0.03
SSBP1-215ENST00000612337 ASAH2BP0C7U1 165 aa15.24■□□□□ 0.03
SSBP1-215ENST00000612337 PGA4P0DJD7 388 aa15.24■□□□□ 0.03
SSBP1-215ENST00000612337 PGA3P0DJD8 388 aa15.24■□□□□ 0.03
SSBP1-215ENST00000612337 PCGF2P35227 344 aa15.24■□□□□ 0.03
SSBP1-215ENST00000612337 TMEM33P57088 247 aa15.24■□□□□ 0.03
SSBP1-215ENST00000612337 MELKQ14680 651 aa15.24■□□□□ 0.03
SSBP1-215ENST00000612337 INTS11Q5TA45 600 aaKnown RBP15.24■□□□□ 0.03
SSBP1-215ENST00000612337 HIST3H2AQ7L7L0 130 aa15.24■□□□□ 0.03
SSBP1-215ENST00000612337 DPPA2Q7Z7J5 298 aa15.24■□□□□ 0.03
SSBP1-215ENST00000612337 TSPYL5Q86VY4 417 aaPredicted RBP15.24■□□□□ 0.03
SSBP1-215ENST00000612337 LRRC17Q8N6Y2 441 aa15.24■□□□□ 0.03
SSBP1-215ENST00000612337 SLC30A7Q8NEW0 376 aa15.24■□□□□ 0.03
SSBP1-215ENST00000612337 TSPEARQ8WU66 669 aa15.24■□□□□ 0.03
SSBP1-215ENST00000612337 HIST1H2ACQ93077 130 aa15.24■□□□□ 0.03
SSBP1-215ENST00000612337 TAMM41Q96BW9 452 aa15.24■□□□□ 0.03
SSBP1-215ENST00000612337 SH3GL3Q99963 347 aa15.24■□□□□ 0.03
SSBP1-215ENST00000612337 RACGAP1Q9H0H5 632 aa15.24■□□□□ 0.03
SSBP1-215ENST00000612337 INTS9Q9NV88 658 aaKnown RBP15.24■□□□□ 0.03
SSBP1-215ENST00000612337 TRIM33Q9UPN9 1127 aa15.24■□□□□ 0.03
SSBP1-215ENST00000612337 A0A1W2PPW3 197 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 SLC22A23A1A5C7 686 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 BCL10O95999 233 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 IGHG1P01857 330 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 TFP02787 698 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 VIMP08670 466 aaKnown RBP15.23■□□□□ 0.03
SSBP1-215ENST00000612337 QDPRP09417 244 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 SAGP10523 405 aaPredicted RBP15.23■□□□□ 0.03
SSBP1-215ENST00000612337 NAT2P11245 290 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 NFYCQ13952 458 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 NRN1LQ496H8 165 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 RGS7BPQ6MZT1 257 aaPredicted RBP15.23■□□□□ 0.03
SSBP1-215ENST00000612337 TMEM53Q6P2H8 277 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 NANOGNBQ7Z5D8 188 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 GLCCI1Q86VQ1 547 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 CARM1Q86X55 608 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 OR10A6Q8NH74 314 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 CLDND2Q8NHS1 167 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 SLC26A7Q8TE54 656 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 RASSF5Q8WWW0 418 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 YIPF5Q969M3 257 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 PRSS27Q9BQR3 290 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 C1orf198Q9H425 327 aa15.23■□□□□ 0.03
SSBP1-215ENST00000612337 ZNF275Q9NSD4 429 aaPredicted RBP15.23■□□□□ 0.03
SSBP1-215ENST00000612337 NCR1O76036 304 aa15.22■□□□□ 0.03
SSBP1-215ENST00000612337 SNAP29O95721 258 aa15.22■□□□□ 0.03
SSBP1-215ENST00000612337 UMPSP11172 480 aa15.22■□□□□ 0.03
SSBP1-215ENST00000612337 SELENOVP59797 346 aa15.22■□□□□ 0.03
SSBP1-215ENST00000612337 HIST3H3Q16695 136 aa15.22■□□□□ 0.03
SSBP1-215ENST00000612337 RINLQ6ZS11 566 aa15.22■□□□□ 0.03
SSBP1-215ENST00000612337 CCDC80Q76M96 950 aa15.22■□□□□ 0.03
SSBP1-215ENST00000612337 PAQR4Q8N4S7 273 aaPredicted RBP15.22■□□□□ 0.03
SSBP1-215ENST00000612337 OR4K5Q8NGD3 323 aa15.22■□□□□ 0.03
SSBP1-215ENST00000612337 MCHR2Q969V1 340 aa15.22■□□□□ 0.03
SSBP1-215ENST00000612337 THOC1Q96FV9 657 aaKnown RBP15.22■□□□□ 0.03
SSBP1-215ENST00000612337 MAGEB18Q96M61 343 aa15.22■□□□□ 0.03
SSBP1-215ENST00000612337 ZNF416Q9BWM5 594 aa15.22■□□□□ 0.03
SSBP1-215ENST00000612337 RNF121Q9H920 327 aa15.22■□□□□ 0.03
SSBP1-215ENST00000612337 MEPEQ9NQ76 525 aaPredicted RBP15.22■□□□□ 0.03
SSBP1-215ENST00000612337 IGLV3-9A0A075B6K5 115 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 CENPBD1B2RD01 187 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 FAM157AC9JC47 383 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 BLOC1S5-TXNDC5H3BN57 136 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 RP2O75695 350 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 PTHP01270 115 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 FAM157BP0CG42 384 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 CCL2P13500 99 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 ZNF250P15622 560 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 GZMMP51124 257 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 CRYBA2P53672 197 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 CLRN1P58418 232 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 NKPD1Q17RQ9 610 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 TBC1D28Q2M2D7 210 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 VMACQ2NL98 169 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 SLC36A2Q495M3 483 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 SLC16A14Q7RTX9 510 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 TMEM186Q96B77 213 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 ZNF347Q96SE7 839 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 SEPHS2Q99611 448 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 MRPL13Q9BYD1 178 aaKnown RBP15.21■□□□□ 0.03
SSBP1-215ENST00000612337 NARFLQ9H6Q4 476 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 CDH20Q9HBT6 801 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 TAAR3PQ9P1P4 343 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 GPR160Q9UJ42 338 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 METRNQ9UJH8 293 aa15.21■□□□□ 0.03
SSBP1-215ENST00000612337 TENM1Q9UKZ4 2725 aa15.2■□□□□ 0.02
SSBP1-215ENST00000612337 C17orf100A8MU93 164 aa15.2■□□□□ 0.02
SSBP1-215ENST00000612337 WNT9BO14905 357 aa15.2■□□□□ 0.02
SSBP1-215ENST00000612337 PPIHO43447 177 aaKnown RBP15.2■□□□□ 0.02
SSBP1-215ENST00000612337 CLPTM1O96005 669 aa15.2■□□□□ 0.02
SSBP1-215ENST00000612337 MT-ND1P03886 318 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms