RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 A0A1B0GUH1 482 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 SCDO00767 359 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 SHOXO15266 292 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 PRAMEF2O60811 474 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 OPN1LWP04000 364 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 LPLP06858 475 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 AKT2P31751 481 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 EGR4Q05215 589 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 MFSD13AQ14CX5 517 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 ZNF74Q16587 644 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 TTLL10Q6ZVT0 673 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 JAGN1Q8N5M9 183 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 FAM46BQ96A09 425 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 MRPL48Q96GC5 212 aaKnown RBP12.75□□□□□ -0.37
COL6A1-207ENST00000612273 B3GNT4Q9C0J1 378 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 OR11A1Q9GZK7 315 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 ZC4H2Q9NQZ6 224 aa12.75□□□□□ -0.37
COL6A1-207ENST00000612273 MRPS33Q9Y291 106 aaKnown RBP12.75□□□□□ -0.37
COL6A1-207ENST00000612273 C2orf16Q68DN1 1984 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 MCRIP1C9JLW8 97 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 GSTZ1O43708 216 aaPredicted RBP12.74□□□□□ -0.37
COL6A1-207ENST00000612273 SLC16A7O60669 478 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 WNT11O96014 354 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 THEGLP0DJG4 465 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 IFNGR1P15260 489 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 MST1P26927 711 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 SPOCK1Q08629 439 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 WDR38Q5JTN6 314 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 CD163Q86VB7 1156 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 FAM219AQ8IW50 185 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 STPG2Q8N412 459 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 SPERTQ8NA61 448 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 RNF166Q96A37 237 aaPredicted RBP12.74□□□□□ -0.37
COL6A1-207ENST00000612273 MIB2Q96AX9 1013 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 SCARF2Q96GP6 870 aaPredicted RBP12.74□□□□□ -0.37
COL6A1-207ENST00000612273 TSPAN32Q96QS1 320 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 C7orf50Q9BRJ6 194 aaKnown RBP12.74□□□□□ -0.37
COL6A1-207ENST00000612273 G6PC3Q9BUM1 346 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 MMP25Q9NPA2 562 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 PIAS3Q9Y6X2 628 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 OR5K3A6NET4 321 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 SUSD5O60279 629 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 PPM1BO75688 479 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 UBL4AP11441 157 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 PRPS1P60891 318 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 ZP2Q05996 745 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 LRFN4Q6PJG9 635 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 UNQ9370/PRO34162Q6UXP9 181 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 BIVMQ86UB2 503 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 ZNF227Q86WZ6 799 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 GPR119Q8TDV5 335 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 METTL21AQ8WXB1 218 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 TTC9Q92623 222 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 CMKLR1Q99788 373 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 TPSD1Q9BZJ3 242 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 C12orf4Q9NQ89 552 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 NPDC1Q9NQX5 325 aaPredicted RBP12.74□□□□□ -0.37
COL6A1-207ENST00000612273 RWDD3Q9Y3V2 267 aa12.74□□□□□ -0.37
COL6A1-207ENST00000612273 SOX1O00570 391 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-207ENST00000612273 XKRYO14609 159 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 TGM6O95932 706 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 APOC3P02656 99 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 ZNF28P17035 718 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 MNDAP41218 407 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 C2orf76Q3KRA6 126 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 SLC16A9Q7RTY1 509 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 PRSS35Q8N3Z0 413 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 C19orf47Q8N9M1 422 aaKnown RBP12.73□□□□□ -0.37
COL6A1-207ENST00000612273 OR4S1Q8NGB4 309 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 DMRTA2Q96SC8 542 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 TRAF4Q9BUZ4 470 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-207ENST00000612273 TAS2R5Q9NYW4 299 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 SEMA4FO95754 770 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 PNPP00491 289 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 ACHEP22303 614 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 GPR3P46089 330 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 HLXQ14774 488 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-207ENST00000612273 ELP2Q6IA86 826 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 LINC00114Q6XXX2 140 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 OR51A2Q8NGJ7 313 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 GPR148Q8TDV2 347 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 B9D1Q9UPM9 204 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 PLSCR5A0PG75 271 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 OR4C45A6NMZ5 311 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 ARPC3O15145 178 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 NDUFB6O95139 128 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 CXCR1P25024 350 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 SDHAP31040 664 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 NUP62P37198 522 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-207ENST00000612273 SEC61A1P61619 476 aaKnown RBP12.73□□□□□ -0.37
COL6A1-207ENST00000612273 TMEM184AQ6ZMB5 413 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 CFAP77Q6ZQR2 320 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 LINC00346Q8IVM7 164 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 TMEM151BQ8IW70 566 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 INTS14Q96SY0 518 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 TINAGL1Q9GZM7 467 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-207ENST00000612273 SYNDIG1Q9H7V2 258 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 CENPMQ9NSP4 180 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 PCOLCE2Q9UKZ9 415 aa12.73□□□□□ -0.37
COL6A1-207ENST00000612273 ABCA7Q8IZY2 2146 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms