RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 SPATA2Q9UM82 520 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 A0A0B4J293 547 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 PDCD5O14737 125 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 IGHMP01871 453 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 SPARCP09486 303 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 ZNF41P51814 821 aaPredicted RBP12.26□□□□□ -0.45
NEK3-205ENST00000610828 ADAM8P78325 824 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 BTBD16Q32M84 506 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 LRRN1Q6UXK5 716 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 UTS2BQ765I0 119 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 KRT74Q7RTS7 529 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 BPHLQ86WA6 291 aaPredicted RBP12.26□□□□□ -0.45
NEK3-205ENST00000610828 ZNF676Q8N7Q3 588 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 DUSP18Q8NEJ0 188 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 OR2G2Q8NGZ5 317 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 SLC22A8Q8TCC7 542 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 TRIM63Q969Q1 353 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 ZFP3Q96NJ6 502 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 SNX18Q96RF0 628 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 GFI1Q99684 422 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 COMMD4Q9H0A8 199 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 TCF7L1Q9HCS4 588 aa12.26□□□□□ -0.45
NEK3-205ENST00000610828 MRPL22Q9NWU5 206 aaKnown RBP12.26□□□□□ -0.45
NEK3-205ENST00000610828 IGLV1-36A0A0B4J1U3 117 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 ANKRD61A6NGH8 418 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 IFITM5A6NNB3 132 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 A8MV72 311 aaPredicted RBP12.25□□□□□ -0.45
NEK3-205ENST00000610828 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.25□□□□□ -0.45
NEK3-205ENST00000610828 MS4A18H0YCH9 400 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 SLC43A1O75387 559 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 CCL4P13236 92 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 MAPK3P27361 379 aaPredicted RBP12.25□□□□□ -0.45
NEK3-205ENST00000610828 DUSP3P51452 185 aaPredicted RBP12.25□□□□□ -0.45
NEK3-205ENST00000610828 INPP5JQ15735 1006 aaPredicted RBP12.25□□□□□ -0.45
NEK3-205ENST00000610828 KCNJ8Q15842 424 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 MEP1BQ16820 701 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 MS4A18Q3C1V0 323 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 AGBL5Q8NDL9 886 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 MFSD8Q8NHS3 518 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 RALGAPA1Q6GYQ0 2036 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 OR4C45A6NMZ5 311 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 NPIPA5E9PKD4 350 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 AIPO00170 330 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 KLK3P07288 261 aaPredicted RBP12.25□□□□□ -0.45
NEK3-205ENST00000610828 FAM157BP0CG42 384 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 IFNGR1P15260 489 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 BLVRAP53004 296 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 TLE3Q04726 772 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 MFSD13AQ14CX5 517 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 LPAL2Q16609 132 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 RNASE12Q5GAN4 147 aaKnown RBP12.25□□□□□ -0.45
NEK3-205ENST00000610828 ATAD3CQ5T2N8 411 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 LYPD8Q6UX82 237 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 H1FNTQ75WM6 255 aaPredicted RBP12.25□□□□□ -0.45
NEK3-205ENST00000610828 PRSS35Q8N3Z0 413 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 RNF138Q8WVD3 245 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 MR1Q95460 341 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 UPRTQ96BW1 309 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 RASL10BQ96S79 203 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 SLITRK2Q9H156 845 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 ABCG5Q9H222 651 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 WDR54Q9H977 334 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 ELOVL3Q9HB03 270 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 ANKRD10Q9NXR5 420 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 NPIPA1Q9UND3 350 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 WIF1Q9Y5W5 379 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 V9GY05 133 aa12.25□□□□□ -0.45
NEK3-205ENST00000610828 TMEM212A6NML5 194 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 NTN3O00634 580 aaPredicted RBP12.24□□□□□ -0.45
NEK3-205ENST00000610828 UBL3O95164 117 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 CRABP1P29762 137 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 PTGDSP41222 190 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 NR4A2P43354 598 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 SRP9P49458 86 aaKnown RBP12.24□□□□□ -0.45
NEK3-205ENST00000610828 CLDN12P56749 244 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 POU3F1Q03052 451 aaPredicted RBP12.24□□□□□ -0.45
NEK3-205ENST00000610828 GLO1Q04760 184 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 SIGLEC14Q08ET2 396 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 TATDN3Q17R31 274 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 TBRG1Q3YBR2 411 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 SLC18B1Q6NT16 456 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 STAC2Q6ZMT1 411 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 BMPERQ8N8U9 685 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 OR51A4Q8NGJ6 313 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 OR10AC1Q8NH08 325 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 ZC3H10Q96K80 434 aaKnown RBP12.24□□□□□ -0.45
NEK3-205ENST00000610828 C5orf34Q96MH7 638 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 ULBP3Q9BZM4 244 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 LIN7BQ9HAP6 207 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 SDHAF3Q9NRP4 125 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 NUFIP1Q9UHK0 495 aaKnown RBP12.24□□□□□ -0.45
NEK3-205ENST00000610828 GTF2A1LQ9UNN4 478 aa12.24□□□□□ -0.45
NEK3-205ENST00000610828 COA3Q9Y2R0 106 aaPredicted RBP12.24□□□□□ -0.45
NEK3-205ENST00000610828 RBMX2Q9Y388 322 aaKnown RBP12.24□□□□□ -0.45
NEK3-205ENST00000610828 TEX51A0A1B0GUA7 166 aa12.23□□□□□ -0.45
NEK3-205ENST00000610828 HMX3A6NHT5 357 aa12.23□□□□□ -0.45
NEK3-205ENST00000610828 ZNF208O43345 1280 aa12.23□□□□□ -0.45
NEK3-205ENST00000610828 FBXO45P0C2W1 286 aa12.23□□□□□ -0.45
NEK3-205ENST00000610828 MSX1P28360 303 aa12.23□□□□□ -0.45
NEK3-205ENST00000610828 RASGEF1BQ0VAM2 473 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms