RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 FKRPQ9H9S5 495 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 IKZF2Q9UKS7 526 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 MRPS2Q9Y399 296 aaKnown RBP20.3■□□□□ 0.84
SHANK2-220ENST00000608988 TIMP1P01033 207 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 GP1BAP07359 652 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 ALOX5APP20292 161 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 ADH7P40394 386 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 PLA2G7Q13093 441 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 ITPRIPL2Q3MIP1 535 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 SHEQ5VZ18 495 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 LIN54Q6MZP7 749 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 RNF44Q7L0R7 432 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 STEAP2Q8NFT2 490 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 FAM131CQ96AQ9 280 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 FAM3DQ96BQ1 224 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 C4orf45Q96LM5 186 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 EDEM2Q9BV94 578 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 SFXN1Q9H9B4 322 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 Q9N2J8 555 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 COMMD9Q9P000 198 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 EPHA6Q9UF33 1036 aa20.3■□□□□ 0.84
SHANK2-220ENST00000608988 PLRG1O43660 514 aaKnown RBP20.29■□□□□ 0.84
SHANK2-220ENST00000608988 RAB3DO95716 219 aa20.29■□□□□ 0.84
SHANK2-220ENST00000608988 HLA-GP17693 338 aa20.29■□□□□ 0.84
SHANK2-220ENST00000608988 RORAP35398 523 aa20.29■□□□□ 0.84
SHANK2-220ENST00000608988 UBE2MP61081 183 aaKnown RBP20.29■□□□□ 0.84
SHANK2-220ENST00000608988 DEFA5Q01523 94 aa20.29■□□□□ 0.84
SHANK2-220ENST00000608988 ZNF74Q16587 644 aa20.29■□□□□ 0.84
SHANK2-220ENST00000608988 C2orf27AQ580R0 203 aa20.29■□□□□ 0.84
SHANK2-220ENST00000608988 VWA2Q5GFL6 755 aa20.29■□□□□ 0.84
SHANK2-220ENST00000608988 FAM166AQ6J272 317 aa20.29■□□□□ 0.84
SHANK2-220ENST00000608988 C17orf107Q6ZR85 190 aa20.29■□□□□ 0.84
SHANK2-220ENST00000608988 BPIFCQ8NFQ6 507 aa20.29■□□□□ 0.84
SHANK2-220ENST00000608988 ASB12Q8WXK4 309 aa20.29■□□□□ 0.84
SHANK2-220ENST00000608988 GPR174Q9BXC1 333 aa20.29■□□□□ 0.84
SHANK2-220ENST00000608988 WSB2Q9NYS7 404 aaPredicted RBP20.29■□□□□ 0.84
SHANK2-220ENST00000608988 IGKV1D-42A0A075B6H8 117 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 OR5H14A6NHG9 310 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 ELOA3DA6NLF2 546 aaPredicted RBP20.28■□□□□ 0.84
SHANK2-220ENST00000608988 CTNNB1P35222 781 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 VEGFBP49765 207 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 EFNB2P52799 333 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 GUCA2AQ02747 115 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 TCEA2Q15560 299 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 C2orf76Q3KRA6 126 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 ELOA3BQ3SY89 546 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 ALG10Q5BKT4 473 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 WBP2NLQ6ICG8 309 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 CACUL1Q86Y37 369 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 RELL2Q8NC24 303 aaPredicted RBP20.28■□□□□ 0.84
SHANK2-220ENST00000608988 ELOA3Q8NG57 546 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 MRTO4Q9UKD2 239 aaKnown RBP20.28■□□□□ 0.84
SHANK2-220ENST00000608988 FAM171A2A8MVW0 826 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 NUDT19A8MXV4 375 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 FOXS1O43638 330 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 EML2O95834 649 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 RENP00797 406 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 AQP2P41181 271 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 CTXN1P60606 82 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 DMWDQ09019 674 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 FAM53BQ14153 422 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 MELKQ14680 651 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 C11orf87Q6NUJ2 197 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 PSRC1Q6PGN9 363 aaPredicted RBP20.28■□□□□ 0.84
SHANK2-220ENST00000608988 PRSS41Q7RTY9 318 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 TMEFF1Q8IYR6 380 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 OR5T3Q8NGG3 340 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 BAHD1Q8TBE0 780 aaPredicted RBP20.28■□□□□ 0.84
SHANK2-220ENST00000608988 ASB17Q8WXJ9 295 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 HERVK_113Q902F9 699 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 CHST6Q9GZX3 395 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 ZDHHC4Q9NPG8 344 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 ERVK-19Q9WJR5 959 aa20.28■□□□□ 0.84
SHANK2-220ENST00000608988 A0A087WV48 116 aa20.27■□□□□ 0.84
SHANK2-220ENST00000608988 BLACEA4D250 179 aa20.27■□□□□ 0.84
SHANK2-220ENST00000608988 PLATP00750 562 aa20.27■□□□□ 0.84
SHANK2-220ENST00000608988 CD74P04233 296 aa20.27■□□□□ 0.84
SHANK2-220ENST00000608988 FCER2P06734 321 aa20.27■□□□□ 0.84
SHANK2-220ENST00000608988 CD37P11049 281 aa20.27■□□□□ 0.84
SHANK2-220ENST00000608988 MAOBP27338 520 aa20.27■□□□□ 0.84
SHANK2-220ENST00000608988 HOXA1P49639 335 aaPredicted RBP20.27■□□□□ 0.84
SHANK2-220ENST00000608988 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.27■□□□□ 0.84
SHANK2-220ENST00000608988 ACOT7LQ6ZUV0 252 aa20.27■□□□□ 0.84
SHANK2-220ENST00000608988 PRSS35Q8N3Z0 413 aa20.27■□□□□ 0.84
SHANK2-220ENST00000608988 INTS14Q96SY0 518 aa20.27■□□□□ 0.84
SHANK2-220ENST00000608988 FAM221BA6H8Z2 402 aa20.26■□□□□ 0.83
SHANK2-220ENST00000608988 OR14I1A6ND48 311 aa20.26■□□□□ 0.83
SHANK2-220ENST00000608988 HOXB1P14653 301 aaPredicted RBP20.26■□□□□ 0.83
SHANK2-220ENST00000608988 MNX1P50219 401 aaPredicted RBP20.26■□□□□ 0.83
SHANK2-220ENST00000608988 GXYLT1Q4G148 440 aa20.26■□□□□ 0.83
SHANK2-220ENST00000608988 PAN3Q58A45 887 aaKnown RBP20.26■□□□□ 0.83
SHANK2-220ENST00000608988 EEF1A1P5Q5VTE0 462 aa20.26■□□□□ 0.83
SHANK2-220ENST00000608988 DGAT2L6Q6ZPD8 337 aa20.26■□□□□ 0.83
SHANK2-220ENST00000608988 ATG4DQ86TL0 474 aaPredicted RBP20.26■□□□□ 0.83
SHANK2-220ENST00000608988 OR4N2Q8NGD1 307 aa20.26■□□□□ 0.83
SHANK2-220ENST00000608988 TSEN15Q8WW01 171 aaKnown RBP20.26■□□□□ 0.83
SHANK2-220ENST00000608988 ATG5Q9H1Y0 275 aa20.26■□□□□ 0.83
SHANK2-220ENST00000608988 CAPN10Q9HC96 672 aa20.26■□□□□ 0.83
SHANK2-220ENST00000608988 GRHPRQ9UBQ7 328 aa20.26■□□□□ 0.83
SHANK2-220ENST00000608988 FAM74A7A6NL05 159 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms