RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 TMEM106AQ96A25 262 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 FRMD6Q96NE9 622 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 CYSLTR2Q9NS75 346 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 RIF1Q5UIP0 2472 aaKnown RBP14.3□□□□□ -0.12
CTSA-214ENST00000606788 PLPP3O14495 311 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 IDH3BO43837 385 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 SYPP08247 313 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 PRKAR1AP10644 381 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 SGCBQ16585 318 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 SLC35D3Q5M8T2 416 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 EEF1A1P5Q5VTE0 462 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 LINGO2Q7L985 606 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 LRRC28Q86X40 367 aaPredicted RBP14.3□□□□□ -0.12
CTSA-214ENST00000606788 LIN7BQ9HAP6 207 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 TCF7L1Q9HCS4 588 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 CFAP47Q6ZTR5 3102 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 NOTOA8MTQ0 251 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 RAMP1O60894 148 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 ALOX5APP20292 161 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 CCR6P51684 374 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 CAMK2DQ13557 499 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 ALKBH1Q13686 389 aaKnown RBP14.3□□□□□ -0.12
CTSA-214ENST00000606788 GPR176Q14439 515 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 CDC20BQ86Y33 519 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 PRSS35Q8N3Z0 413 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 RFT1Q96AA3 541 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 MAP6Q96JE9 813 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 KLHL15Q96M94 604 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 OR5B2Q96R09 309 aa14.3□□□□□ -0.12
CTSA-214ENST00000606788 NPIPA5E9PKD4 350 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 SLC19A2O60779 497 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 ITGA10O75578 1167 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 MT-ND4P03905 459 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 MFGE8Q08431 387 aaPredicted RBP14.29□□□□□ -0.12
CTSA-214ENST00000606788 PUDPQ08623 228 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 EIF2B1Q14232 305 aaKnown RBP14.29□□□□□ -0.12
CTSA-214ENST00000606788 LRFN4Q6PJG9 635 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 CMTM4Q8IZR5 234 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 BEST4Q8NFU0 473 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 OR2G2Q8NGZ5 317 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 SETD6Q8TBK2 473 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 SOSTQ9BQB4 213 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 NEK6Q9HC98 313 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 ZNF221Q9UK13 617 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 NPIPA1Q9UND3 350 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 LOC101059948A0A1B0GTJ6 334 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 MEIS3P1A6NDR6 274 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 D6RAR5 112 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 SERPINA3P01011 423 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 UCHL1P09936 223 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 ADRA2CP18825 462 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 DDOSTP39656 456 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 C17orf67Q0P5P2 114 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 WDR38Q5JTN6 314 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 KRT77Q7Z794 578 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 ZNF248Q8NDW4 579 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 GNRHR2Q96P88 292 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 RASL10BQ96S79 203 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 SEC61A2Q9H9S3 476 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 PLSCR3Q9NRY6 295 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 GPN3Q9UHW5 284 aaPredicted RBP14.29□□□□□ -0.12
CTSA-214ENST00000606788 PAIP2BQ9ULR5 123 aaKnown RBP14.29□□□□□ -0.12
CTSA-214ENST00000606788 ALG5Q9Y673 324 aa14.29□□□□□ -0.12
CTSA-214ENST00000606788 IGHV3-15A0A0B4J1V0 119 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 A0A1W2PQD3 144 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 TRIM3O75382 744 aaPredicted RBP14.28□□□□□ -0.12
CTSA-214ENST00000606788 SLC43A1O75387 559 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 ZNF41P51814 821 aaPredicted RBP14.28□□□□□ -0.12
CTSA-214ENST00000606788 MRPS15P82914 257 aaKnown RBP14.28□□□□□ -0.12
CTSA-214ENST00000606788 ZNF385CQ66K41 422 aaPredicted RBP14.28□□□□□ -0.12
CTSA-214ENST00000606788 CARFQ8N187 725 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 OR6F1Q8NGZ6 308 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 TGIF2Q9GZN2 237 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 SLC22A23A1A5C7 686 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 OR6C76A6NM76 312 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 MS4A18H0YCH9 400 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 ZFAND5O76080 213 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 NPR2P20594 1047 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 CDAP32320 146 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 BIDP55957 195 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 SF3B4Q15427 424 aaKnown RBP eCLIP14.28□□□□□ -0.126e-7■■■■■ 34.4
CTSA-214ENST00000606788 MS4A18Q3C1V0 323 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 BCL2L15Q5TBC7 163 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 ZNF544Q6NX49 715 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 PLPP7Q8NBV4 271 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 RBFOX1Q9NWB1 397 aaKnown RBP14.28□□□□□ -0.12
CTSA-214ENST00000606788 KLHL13Q9P2N7 655 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 B3GALT1Q9Y5Z6 326 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 ZNF814B7Z6K7 855 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 NPIPB7O75200 414 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 TACSTD2P09758 323 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 SLC25A1P53007 311 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 ZXDAP98168 799 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 ZNF684Q5T5D7 378 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 SFRP4Q6FHJ7 346 aaPredicted RBP14.28□□□□□ -0.12
CTSA-214ENST00000606788 SLC7A5P1Q8MH63 180 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 ACOT12Q8WYK0 555 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 NAT6Q93015 286 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 TXNIPQ9H3M7 391 aa14.28□□□□□ -0.12
CTSA-214ENST00000606788 TMEM165Q9HC07 324 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms